RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 VHLLQ6RSH7 139 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 CASP12Q6UXS9 341 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 CCNYL1Q8N7R7 359 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 HPS1Q92902 700 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 THUMPD3Q9BV44 507 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 RRAGDQ9NQL2 400 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZCCHC3Q9NUD5 404 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 NINJ2Q9NZG7 142 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 MALT1Q9UDY8 824 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 DTNAQ9Y4J8 743 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 B9A039 149 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 RSL1D1O76021 490 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 HMGN2P05204 90 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ERCC1P07992 297 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 GSTA1P08263 222 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 UBL4AP11441 157 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 DAOP14920 347 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 CDH2P19022 906 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ATP5F1P24539 256 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ATP12AP54707 1039 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 PRPS1P60891 318 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZNF385BQ569K4 471 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ABLIM2Q6H8Q1 611 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLC22A9Q8IVM8 553 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 SEMA6DQ8NFY4 1073 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 PIGXQ8TBF5 258 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZNF418Q8TF45 676 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 STACQ99469 402 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 PIGUQ9H490 435 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 REEP4Q9H6H4 257 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 DUSP22Q9NRW4 184 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 TMEM216Q9P0N5 145 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 PKD1L1Q8TDX9 2849 aa16.55■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZNF716A6NP11 495 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 KLF11O14901 512 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 EIF4E2O60573 245 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 COMPP49747 757 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 PRKAA2P54646 552 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 CDH15P55291 814 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLC25A3Q00325 362 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 LGALS3BPQ08380 585 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 SCGB2A2Q13296 93 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 CCNIQ14094 377 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 SYT14P1Q58G82 188 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 DCST2Q5T1A1 773 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 UGT2A3Q6UWM9 527 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 C17orf78Q8N4C9 275 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 ADAMTS15Q8TE58 950 aa16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 FAM120BQ96EK7 910 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-209ENST00000470006 LILRA1O75019 489 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 OR4A8P0C604 315 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 NTF4P34130 210 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 MAGEA8P43361 318 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 IDH3GP51553 393 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 SESN3P58005 492 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 SHQ1Q6PI26 577 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 TRIM46Q7Z4K8 759 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 CCDC103Q8IW40 242 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 C1orf162Q8NEQ5 155 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 CLHC1Q8NHS4 586 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 TMEM234Q8WY98 164 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 L3HYPDHQ96EM0 354 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 TSSK3Q96PN8 268 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 CA10Q9NS85 328 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 ACSS1Q9NUB1 689 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 DCTN4Q9UJW0 460 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 FAF1Q9UNN5 650 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 PCDHB14Q9Y5E9 798 aa16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 SPIN1Q9Y657 262 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-209ENST00000470006 TRIM77I1YAP6 450 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 TACSTD2P09758 323 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 IFNGR1P15260 489 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 GIFP27352 417 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 DVL1P1P54792 670 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 OR2B6P58173 313 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 TP53BP2Q13625 1128 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZSWIM7Q19AV6 140 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 SPDYE7PQ495Y7 208 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 THSD4Q6ZMP0 1018 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 GLCCI1Q86VQ1 547 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLC25A43Q8WUT9 341 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 ST8SIA1Q92185 356 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 ACTRT3Q9BYD9 372 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 PARPBPQ9NWS1 579 aa16.52■□□□□ 0.24
NCKIPSD-209ENST00000470006 TMEM89A2RUT3 159 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 FAM157AC9JC47 383 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 SKAP2O75563 359 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 CRYAAP02489 173 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 SNRPAP09012 282 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 SLC1A3P43003 542 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 PPOXP50336 477 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 SLC7A5Q01650 507 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 TRIP10Q15642 601 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 HIKESHIQ53FT3 197 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 PDLIM3Q53GG5 364 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 PDZK1Q5T2W1 519 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 PEG10Q86TG7 708 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 DCAKDQ8WVC6 231 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 GSTO2Q9H4Y5 243 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms