RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 SELENONQ9NZV5 590 aa18.83■□□□□ 0.6
BRAF-202ENST00000469930 OSGIN1Q9UJX0 560 aa18.83■□□□□ 0.6
BRAF-202ENST00000469930 VDAC3Q9Y277 283 aa18.83■□□□□ 0.6
BRAF-202ENST00000469930 HTR3EA5X5Y0 456 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 CLOCKO15516 846 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 ZNF208O43345 1280 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 MGRN1O60291 552 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 HCN1O60741 890 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 CST1P01037 141 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 IGF2P01344 180 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 ZNF24P17028 368 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 TACR3P29371 465 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 RBM34P42696 430 aaKnown RBP18.82■□□□□ 0.6
BRAF-202ENST00000469930 MAGEA5P43359 124 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 LIMS1P48059 325 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 CLK1P49759 484 aaKnown RBP18.82■□□□□ 0.6
BRAF-202ENST00000469930 NHSL2Q5HYW2 709 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 C5orf46Q6UWT4 87 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 ADGRG3Q86Y34 549 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 UBL7Q96S82 380 aaPredicted RBP18.82■□□□□ 0.6
BRAF-202ENST00000469930 TMEM43Q9BTV4 400 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 BDH2Q9BUT1 245 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 SLC19A3Q9BZV2 496 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 DCLRE1BQ9H816 532 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 MAN2C1Q9NTJ4 1040 aa18.82■□□□□ 0.6
BRAF-202ENST00000469930 MAP1BP46821 2468 aaKnown RBP18.82■□□□□ 0.6
BRAF-202ENST00000469930 DSPP15924 2871 aaKnown RBP18.82■□□□□ 0.6
BRAF-202ENST00000469930 PKD1L2Q7Z442 2459 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 A0A1B0GVC2 190 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 GMFGO60234 142 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 SUSD5O60279 629 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 TIPRLO75663 272 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 TRAPPC6AO75865 159 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 LDLRP01130 860 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 YAP1P46937 504 aaKnown RBP18.81■□□□□ 0.6
BRAF-202ENST00000469930 GFRA1P56159 465 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 ALDH6A1Q02252 535 aaKnown RBP18.81■□□□□ 0.6
BRAF-202ENST00000469930 FOXF1Q12946 379 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 ZNF324BQ6AW86 544 aaPredicted RBP18.81■□□□□ 0.6
BRAF-202ENST00000469930 RNF113BQ8IZP6 322 aaKnown RBP18.81■□□□□ 0.6
BRAF-202ENST00000469930 NRBF2Q96F24 287 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 EPYCQ99645 322 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 BARD1Q99728 777 aaKnown RBP18.81■□□□□ 0.6
BRAF-202ENST00000469930 NTN4Q9HB63 628 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 SERINC1Q9NRX5 453 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 LYVE1Q9Y5Y7 322 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 EPG5Q9HCE0 2579 aa18.81■□□□□ 0.6
BRAF-202ENST00000469930 KMT2BQ9UMN6 2715 aaPredicted RBP18.8■□□□□ 0.6
BRAF-202ENST00000469930 TMED7-TICAM2A0A0A6YYA0 188 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 OR2M5A3KFT3 312 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 FAM166BA8MTA8 275 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 DIRAS1O95057 198 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 GADD45GO95257 159 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 MT-ND1P03886 318 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 CXCR1P25024 350 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 RRM2P31350 389 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 RFC3P40938 356 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 PMP22Q01453 160 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 MERTKQ12866 999 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 SELENBP1Q13228 472 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 BCL2A1Q16548 175 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.8■□□□□ 0.6
BRAF-202ENST00000469930 CMPK2Q5EBM0 449 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 LINC00471Q8N535 108 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 OR4C15Q8NGM1 316 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 OR14L1PQ8NHC6 308 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 STK35Q8TDR2 534 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 SLC25A43Q8WUT9 341 aaPredicted RBP18.8■□□□□ 0.6
BRAF-202ENST00000469930 ACOT11Q8WXI4 607 aaPredicted RBP18.8■□□□□ 0.6
BRAF-202ENST00000469930 CENPNQ96H22 339 aaPredicted RBP18.8■□□□□ 0.6
BRAF-202ENST00000469930 REEP1Q9H902 201 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 CTPS2Q9NRF8 586 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 C6orf203Q9P0P8 240 aaPredicted RBP18.8■□□□□ 0.6
BRAF-202ENST00000469930 CHRNA9Q9UGM1 479 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 SLC7A7Q9UM01 511 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 TMED7Q9Y3B3 224 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 SPIN1Q9Y657 262 aaPredicted RBP18.8■□□□□ 0.6
BRAF-202ENST00000469930 AP4B1Q9Y6B7 739 aa18.8■□□□□ 0.6
BRAF-202ENST00000469930 ATMQ13315 3056 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 TFECO14948 347 aaPredicted RBP18.79■□□□□ 0.6
BRAF-202ENST00000469930 ATXN7O15265 892 aaPredicted RBP18.79■□□□□ 0.6
BRAF-202ENST00000469930 EFNA2O43921 213 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 NPIPB7O75200 414 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 ACTL6AO96019 429 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 RAC1P63000 192 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 SPIBQ01892 262 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 TOMM20Q15388 145 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 KRTCAP3Q53RY4 240 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 WIPI1Q5MNZ9 446 aaPredicted RBP18.79■□□□□ 0.6
BRAF-202ENST00000469930 TRILQ7L0X0 811 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 YRDCQ86U90 279 aaKnown RBP18.79■□□□□ 0.6
BRAF-202ENST00000469930 LILRA2Q8N149 483 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 PQLC1Q8N2U9 271 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 OR6S1Q8NH40 331 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 LRTOMTQ8WZ04 291 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 SLC39A7Q92504 469 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 NPAS1Q99742 590 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 POTEKPQ9BYX7 375 aa18.79■□□□□ 0.6
BRAF-202ENST00000469930 STX18Q9P2W9 335 aaKnown RBP18.79■□□□□ 0.6
BRAF-202ENST00000469930 STOML1Q9UBI4 398 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms