RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 J3QLW9 94 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 GAAP10253 952 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ZNF19P17023 458 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ZNF3P17036 446 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ACVR1BP36896 505 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 PGDP52209 483 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 BDH1Q02338 343 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ZNHIT3Q15649 155 aaPredicted RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 FAAH2Q6GMR7 532 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 GHDCQ8N2G8 530 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 OR13C5Q8NGS8 318 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 OR5J2Q8NH18 312 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 CAPSLQ8WWF8 208 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 SMPDL3BQ92485 455 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 EFHD2Q96C19 240 aaPredicted RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 RBM18Q96H35 190 aaKnown RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ZNF486Q96H40 463 aaPredicted RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 DMRTB1Q96MA1 342 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 LMF1Q96S06 567 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ORAI3Q9BRQ5 295 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 CCDC86Q9H6F5 360 aaKnown RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 TRIM36Q9NQ86 728 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 LRIT1Q9P2V4 623 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 TMEM184BQ9Y519 407 aaPredicted RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 N6AMT1Q9Y5N5 214 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 SEC16AO15027 2179 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 IMPA2O14732 288 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 CT45A8P0DMV1 189 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 CT45A9P0DMV2 189 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ELK1P19419 428 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 CT45A2Q5DJT8 189 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 GRAMD2AQ8IUY3 354 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 RDH10Q8IZV5 341 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 OR52E2Q8NGJ4 325 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 OR5M3Q8NGP4 307 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 OR4K13Q8NH42 304 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 DEPDC7Q96QD5 511 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
CBWD3-205ENST00000469687 NDC1Q9BTX1 674 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 ERVK-19Q9WJR5 959 aa13.51□□□□□ -0.25
CBWD3-205ENST00000469687 A0A1B0GVC2 190 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 A6NIN4 97 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 KRT8P05787 483 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 RNH1P13489 461 aaKnown RBP13.5□□□□□ -0.25
CBWD3-205ENST00000469687 HIST1H1CP16403 213 aaKnown RBP13.5□□□□□ -0.25
CBWD3-205ENST00000469687 CCR5P51681 352 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 FGFBP1Q14512 234 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 PARGQ86W56 976 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 SCAIQ8N9R8 606 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 OR4C3Q8NH37 302 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 C16orf52Q8NHV5 167 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 TP53INP1Q96A56 240 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 ZMYND19Q96E35 227 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-205ENST00000469687 AHCYL2Q96HN2 611 aaKnown RBP13.5□□□□□ -0.25
CBWD3-205ENST00000469687 ERMAPQ96PL5 475 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-205ENST00000469687 TPSD1Q9BZJ3 242 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 ERVMER34-1Q9H9K5 563 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 ADAM18Q9Y3Q7 739 aa13.5□□□□□ -0.25
CBWD3-205ENST00000469687 MCIDASD6RGH6 385 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 NPIPB9F8W1W9 429 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 TFP02787 698 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 MT-ND5P03915 603 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 IFI6P09912 130 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 PEPDP12955 493 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 HK1P19367 917 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 MTNR1BP49286 362 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 LCN1P1Q5VSP4 162 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 TRIQKQ629K1 86 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 LINC00114Q6XXX2 140 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 RTL4Q6ZR62 310 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 VASH1Q7L8A9 365 aaPredicted RBP13.49□□□□□ -0.25
CBWD3-205ENST00000469687 SLC7A5P1Q8MH63 180 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 LSMEM1Q8N8F7 131 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 ZNRF4Q8WWF5 429 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 PMM1Q92871 262 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 KLHDC7BQ96G42 594 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 PGLYRP3Q96LB9 341 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 BEX2Q9BXY8 128 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 TRIM2Q9C040 744 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 KCNN2Q9H2S1 579 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 TP63Q9H3D4 680 aaPredicted RBP13.49□□□□□ -0.25
CBWD3-205ENST00000469687 PRTFDC1Q9NRG1 225 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 WSB2Q9NYS7 404 aaPredicted RBP13.49□□□□□ -0.25
CBWD3-205ENST00000469687 FBXL21Q9UKT6 434 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 A0A1W2PPC4 97 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 PLPP2O43688 288 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 CTNSO60931 367 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 GALP22466 123 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 MYL9P24844 172 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 HOXD12P35452 270 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 GPR3P46089 330 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 TMEM53Q6P2H8 277 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 GATSQ8NAP1 163 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 ENKURQ8TC29 256 aa13.49□□□□□ -0.25
CBWD3-205ENST00000469687 RNF121Q9H920 327 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms