RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SAGP10523 405 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 RHCEP18577 417 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 APEX1P27695 318 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 RPS19P39019 145 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 SOX3P41225 446 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 RGS6P49758 472 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 PTGES3Q15185 160 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 DEFB133Q30KQ1 61 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 RNASE12Q5GAN4 147 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 RHOUQ7L0Q8 258 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 SLC16A11Q8NCK7 471 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 OR2L3Q8NG85 312 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 OR51A7Q8NH64 312 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 THAP3Q8WTV1 239 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 SMAP2Q8WU79 429 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 RHOVQ96L33 236 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 SLC38A3Q99624 504 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 SGPP1Q9BX95 441 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 BHLHE41Q9C0J9 482 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 ANKRD19PQ9H560 264 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 MVB12BQ9H7P6 319 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 OR10H1Q9Y4A9 318 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 NBASA2RRP1 2371 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 RNASET2O00584 256 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 RDH16O75452 317 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 SEMA4FO95754 770 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 PRF1P14222 555 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 UQCRC2P22695 453 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 STOMP27105 288 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 MPIP34949 423 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 RORCP51449 518 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 ZCCHC12Q6PEW1 402 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 PAQR6Q6TCH4 344 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 FAM46AQ96IP4 442 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 ERMAPQ96PL5 475 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 GAL3ST4Q96RP7 486 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 TGIF2Q9GZN2 237 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 EGLN3Q9H6Z9 239 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 RBFOX1Q9NWB1 397 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 GHRLQ9UBU3 117 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 A0A0A6YYC8 382 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 I3L1I5 382 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 LALBAP00709 142 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 CTSBP07858 339 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 CPMP14384 443 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 JUNDP17535 347 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 HIST1H1TP22492 207 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 FCARP24071 287 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 MC2RQ01718 297 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 STX4Q12846 297 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 GXYLT1Q4G148 440 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 C3P1Q6ZMU1 363 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 OR6T1Q8NGN1 323 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 RSC1A1Q92681 617 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 TGM7Q96PF1 710 aa11.47□□□□□ -0.57
USP11-206ENST00000469080 H2AFY2Q9P0M6 372 aaPredicted RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 APOBEC3BQ9UH17 382 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 MRPS2Q9Y399 296 aaKnown RBP11.47□□□□□ -0.57
USP11-206ENST00000469080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 A0A1W2PQL4 384 aaPredicted RBP11.46□□□□□ -0.57
USP11-206ENST00000469080 CHP2O43745 196 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 UGDHO60701 494 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 MRPL3P09001 348 aaKnown RBP11.46□□□□□ -0.57
USP11-206ENST00000469080 TLX1P31314 330 aaPredicted RBP11.46□□□□□ -0.57
USP11-206ENST00000469080 ZNF155Q12901 538 aaPredicted RBP11.46□□□□□ -0.57
USP11-206ENST00000469080 PON3Q15166 354 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.46□□□□□ -0.57
USP11-206ENST00000469080 TRMT12Q53H54 448 aaKnown RBP11.46□□□□□ -0.57
USP11-206ENST00000469080 NKAIN2Q5VXU1 208 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 OTPQ5XKR4 325 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 OR7E24Q6IFN5 339 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 SLC30A6Q6NXT4 461 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 FIGLAQ6QHK4 219 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 LCTLQ6UWM7 567 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 TMEM64Q6YI46 380 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 OR9A4Q8NGU2 314 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 FAM3CQ92520 227 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 CDS1Q92903 461 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 C1GALT1C1Q96EU7 318 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 SFXN2Q96NB2 322 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 FOXQ1Q9C009 403 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 HDHD2Q9H0R4 259 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 TBC1D17Q9HA65 648 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 C3orf14Q9HBI5 128 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 SLC6A20Q9NP91 592 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 CLN6Q9NWW5 311 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 P2RX2Q9UBL9 471 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 KIF25Q9UIL4 384 aa11.46□□□□□ -0.57
USP11-206ENST00000469080 CDC14CA4D256 554 aa11.46□□□□□ -0.58
USP11-206ENST00000469080 LRIT2A6NDA9 550 aa11.46□□□□□ -0.58
USP11-206ENST00000469080 RPL3P39023 403 aaKnown RBP11.46□□□□□ -0.58
USP11-206ENST00000469080 MAD2L1BPQ15013 274 aaPredicted RBP11.46□□□□□ -0.58
USP11-206ENST00000469080 TIMM50Q3ZCQ8 353 aa11.46□□□□□ -0.58
USP11-206ENST00000469080 KLHL22Q53GT1 634 aa11.46□□□□□ -0.58
USP11-206ENST00000469080 Q8N402 240 aa11.46□□□□□ -0.58
USP11-206ENST00000469080 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms