RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MBTD1Q05BQ5 628 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SRSF4Q08170 494 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PJVKQ0ZLH3 352 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MTAPQ13126 283 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 IL10RAQ13651 578 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GTF2H2Q13888 395 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 BOP1Q14137 746 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 DOC2AQ14183 400 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GRB14Q14449 540 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 KIR3DS1Q14943 382 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RHEBQ15382 184 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ZNHIT3Q15649 155 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 INPP5JQ15735 1006 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MAPK14Q16539 360 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ZSWIM7Q19AV6 140 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CHRFAM7AQ494W8 412 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SLC36A2Q495M3 483 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 USP39Q53GS9 565 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RAB41Q5JT25 222 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ACER2Q5QJU3 275 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 FAM182AQ5T1J6 154 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 HENMT1Q5T8I9 393 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 AWAT2Q6E213 333 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3CQ6IPX1 549 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 HEPHL1Q6MZM0 1159 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GTF2H2CQ6P1K8 395 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 IL27RAQ6UWB1 636 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF783Q6ZMS7 281 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ACOT7LQ6ZUV0 252 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 P4HA3Q7Z4N8 544 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GPSM1Q86YR5 675 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 LAS2Q8IYD9 372 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3Q8IZP1 549 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR4N4Q8N0Y3 316 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SLC5A8Q8N695 610 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR9Q2Q8NGE9 314 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR5T3Q8NGG3 340 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR56B1Q8NGI3 324 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR9A4Q8NGU2 314 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR6B3Q8NGW1 331 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR2L8Q8NGY9 312 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OR5W2Q8NH69 310 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SMIM4Q8WVI0 70 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 NT5C3BQ969T7 300 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SLAMF9Q96A28 289 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 S100PBPQ96BU1 408 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CXorf40BQ96DE9 158 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MVB12AQ96EY5 273 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 C1orf159Q96HA4 380 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF558Q96NG5 402 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 P2RX7Q99572 595 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TCF25Q9BQ70 676 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 LRFN3Q9BTN0 628 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFAF3Q9BU61 184 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TSSK6Q9BXA6 273 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TM6SF2Q9BZW4 377 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CHST5Q9GZS9 411 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 AP5M1Q9H0R1 490 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 METTL8Q9H825 291 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SEC61A2Q9H9S3 476 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RPF1Q9H9Y2 349 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 LRTM1Q9HBL6 345 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ASCL3Q9NQ33 180 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 NRBP2Q9NSY0 501 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MED17Q9NVC6 651 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM248Q9NWD8 314 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SLC25A37Q9NYZ2 338 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 COMMD9Q9P000 198 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 COX16Q9P0S2 106 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PIPOXQ9P0Z9 390 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF282Q9UDV7 671 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TESQ9UGI8 421 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 OPN4Q9UHM6 478 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 KCND3Q9UK17 655 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TSPAN16Q9UKR8 245 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ADAMTS5Q9UNA0 930 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ST3GAL5Q9UNP4 418 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 DHRS7Q9Y394 339 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 EMC9Q9Y3B6 208 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 NEUROG3Q9Y4Z2 214 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PCDHB1Q9Y5F3 818 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ANKRD12Q6UB98 2062 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 DENND4AQ7Z401 1863 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 DOCK5Q9H7D0 1870 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TRAV1-2A0A0B4J238 106 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM200CA6NKL6 621 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MAGEB17A8MXT2 336 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MASP2O00187 686 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SIGLEC5O15389 551 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TOX3O15405 576 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ARPC5O15511 151 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 IRAK2O43187 625 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 HSPA12AO43301 675 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 EEF1E1O43324 174 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MBTPS2O43462 519 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 EIF4E2O60573 245 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TSPAN2O60636 221 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms