RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SULT2B1O00204 365 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 SMAD9O15198 467 aaKnown RBP19.34■□□□□ 0.69
TTC28-204ENST00000468807 FESP07332 822 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 DIO1P49895 249 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 CHRNEQ04844 493 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 SYT14P1Q58G82 188 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 ZNF621Q6ZSS3 439 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 SPATA19Q7Z5L4 167 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 ARFGAP2Q8N6H7 521 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 PNPT1Q8TCS8 783 aaKnown RBP19.34■□□□□ 0.69
TTC28-204ENST00000468807 TMEM171Q8WVE6 324 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 ZG16BQ96DA0 208 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 CCDC115Q96NT0 180 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 OR52E6Q96RD3 313 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 ZNF300Q96RE9 604 aaPredicted RBP19.34■□□□□ 0.69
TTC28-204ENST00000468807 INPP5KQ9BT40 448 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 BCO1Q9HAY6 547 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.34■□□□□ 0.69
TTC28-204ENST00000468807 THAP1Q9NVV9 213 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 PRSS50Q9UI38 385 aa19.34■□□□□ 0.69
TTC28-204ENST00000468807 SPIN1Q9Y657 262 aaPredicted RBP19.34■□□□□ 0.69
TTC28-204ENST00000468807 CLDN24A6NM45 220 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 TRPC5OSA6NMA1 111 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 HMGN4O00479 90 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 HDAC3O15379 428 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 CLOCKO15516 846 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 CYTIPO60759 359 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 DNAJA2O60884 412 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 GSNP06396 782 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 PGRP06401 933 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 CCNA2P20248 432 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 IL12AP29459 219 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 CDKN2CP42773 168 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 WDR4P57081 412 aaKnown RBP19.33■□□□□ 0.68
TTC28-204ENST00000468807 CSNK2A1P68400 391 aaPredicted RBP19.33■□□□□ 0.68
TTC28-204ENST00000468807 SYPL1Q16563 259 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 CLEC9AQ6UXN8 241 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 ANKFN1Q8N957 763 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 FAM71CQ8NEG0 241 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 SLC25A43Q8WUT9 341 aaPredicted RBP19.33■□□□□ 0.68
TTC28-204ENST00000468807 AKAP1Q92667 903 aaKnown RBP eCLIP19.33■□□□□ 0.68
TTC28-204ENST00000468807 SAP130Q9H0E3 1048 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 CTPS2Q9NRF8 586 aa19.33■□□□□ 0.68
TTC28-204ENST00000468807 ING1Q9UK53 422 aaPredicted RBP19.33■□□□□ 0.68
TTC28-204ENST00000468807 PRAMEF27A3QJZ7 478 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 ZNF814B7Z6K7 855 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 H7C1Q1 480 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 HS3ST1O14792 307 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 SMAD7O15105 426 aaKnown RBP19.32■□□□□ 0.68
TTC28-204ENST00000468807 LYZL6O75951 148 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 HOXB4P17483 251 aaPredicted RBP19.32■□□□□ 0.68
TTC28-204ENST00000468807 APOBEC1P41238 236 aaKnown RBP19.32■□□□□ 0.68
TTC28-204ENST00000468807 PTH2RP49190 550 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 ANXA11P50995 505 aaKnown RBP19.32■□□□□ 0.68
TTC28-204ENST00000468807 KCNJ10P78508 379 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 ITGADQ13349 1161 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 P2RY6Q15077 328 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 TAB1Q15750 504 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 STK11Q15831 433 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 DNAJC14Q6Y2X3 702 aaPredicted RBP19.32■□□□□ 0.68
TTC28-204ENST00000468807 TMPPEQ6ZT21 453 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 BHLHA15Q7RTS1 189 aaPredicted RBP19.32■□□□□ 0.68
TTC28-204ENST00000468807 ZNF100Q8IYN0 542 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 RAB3IL1Q8TBN0 382 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 OIT3Q8WWZ8 545 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 HSD17B8Q92506 261 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 ZHX1-C8orf76Q96EF9 292 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 NGBQ9NPG2 151 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 CHRNA9Q9UGM1 479 aa19.32■□□□□ 0.68
TTC28-204ENST00000468807 USF3Q68DE3 2245 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 CD3EP07766 207 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 GUSBP08236 651 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 OR3A2P47893 321 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 IDH2P48735 452 aaKnown RBP19.31■□□□□ 0.68
TTC28-204ENST00000468807 LTBQ06643 244 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 ATG16L1Q676U5 607 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 Q6ZT83 130 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 GRINAQ7Z429 371 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 GALNT5Q7Z7M9 940 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 CIARTQ8N365 385 aaPredicted RBP19.31■□□□□ 0.68
TTC28-204ENST00000468807 TMEM204Q9BSN7 226 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 CCDC106Q9BWC9 280 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 POTEKPQ9BYX7 375 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 CXorf56Q9H5V9 222 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 ESRP2Q9H6T0 727 aaKnown RBP19.31■□□□□ 0.68
TTC28-204ENST00000468807 NKIRAS1Q9NYS0 192 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 RNF115Q9Y4L5 304 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 GPR45Q9Y5Y3 372 aa19.31■□□□□ 0.68
TTC28-204ENST00000468807 NSD1Q96L73 2696 aaPredicted RBP19.3■□□□□ 0.68
TTC28-204ENST00000468807 TRIM64A6NGJ6 449 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 TRIM64BA6NI03 449 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 SNNO75324 88 aaPredicted RBP19.3■□□□□ 0.68
TTC28-204ENST00000468807 CHRM4P08173 479 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 NR2F1P10589 423 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 MAGOHP61326 146 aaKnown RBP19.3■□□□□ 0.68
TTC28-204ENST00000468807 PRSS57Q6UWY2 283 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 UBE2J2Q8N2K1 259 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 ZNF611Q8N823 705 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 CNOT9Q92600 299 aaKnown RBP19.3■□□□□ 0.68
TTC28-204ENST00000468807 TRNT1Q96Q11 434 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms