RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZNF786Q8N393 782 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 COX18Q8N8Q8 333 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 FAM81AQ8TBF8 368 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 C16orf58Q96GQ5 468 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 REXO5Q96IC2 774 aaKnown RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 SFXN2Q96NB2 322 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 INPP5KQ9BT40 448 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 RTN4RQ9BZR6 473 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 DSN1Q9H410 356 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 CXorf36Q9H7Y0 433 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 CALHM2Q9HA72 323 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 SNX8Q9Y5X2 465 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 APCP25054 2843 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 A0A087WXM4 84 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 MBD3L4A6NDZ8 208 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 MBD3L3A6NE82 208 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 MBD3L5A6NJ08 208 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 C17orf51A8MQB3 221 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 ZIC3O60481 467 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 SOX30O94993 753 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 KCNK2O95069 426 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 HPRP00739 348 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 IL2RAP01589 272 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 HOXB9P17482 250 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 ALDH3A2P51648 485 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 DAG1Q14118 895 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 CDC73Q6P1J9 531 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 MARCH3Q86UD3 253 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 LIX1LQ8IVB5 337 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 MBD3L2Q8NHZ7 208 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 C14orf79Q96F83 325 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 TRIB1Q96RU8 372 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 BTBD2Q9BX70 525 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 ACTRT3Q9BYD9 372 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 PIGUQ9H490 435 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 NTN4Q9HB63 628 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 DCAF13Q9NV06 445 aaKnown RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 PTTG2Q9NZH5 202 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ALG1L2C9J202 215 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ANGPTL1O95841 491 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 GSNP06396 782 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 GNAO1P09471 354 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ZNF708P17019 499 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 TBXA2RP21731 343 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ALDH3B2P48448 385 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 LHX2P50458 406 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 GZMMP51124 257 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 B3GALT5-AS1P59052 145 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 POU6F2P78424 691 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 LASP1Q14847 261 aaKnown RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 BCL2A1Q16548 175 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 LRRC23Q53EV4 343 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 CYBRD1Q53TN4 286 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 OTUD3Q5T2D3 398 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 OR4F3Q6IEY1 312 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ANKRD46Q86W74 232 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ZDHHC13Q8IUH4 622 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 CLEC4FQ8N1N0 589 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 NAXEQ8NCW5 288 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 OR8J2Q8NGG1 315 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 DUSP19Q8WTR2 217 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 UCN2Q96RP3 112 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 SLC6A13Q9NSD5 602 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 MED11Q9P086 117 aa13.08□□□□□ -0.32
COL27A1-203ENST00000468565 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-203ENST00000468565 LINC01387J3KSC0 135 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
COL27A1-203ENST00000468565 GNGT2O14610 69 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 DVL2O14641 736 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 PRKD3O94806 890 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
COL27A1-203ENST00000468565 CST1P01037 141 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 ETS2P15036 469 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 HK1P19367 917 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 SSTR2P30874 369 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 HBA1P69905 142 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 ADARB1P78563 741 aaKnown RBP13.07□□□□□ -0.32
COL27A1-203ENST00000468565 SPDYE7PQ495Y7 208 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 GLYR1Q49A26 553 aaPredicted RBP13.07□□□□□ -0.32
COL27A1-203ENST00000468565 BHLHB9Q6PI77 547 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 APOOLQ6UXV4 268 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 STK32CQ86UX6 486 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 NMD3Q96D46 503 aaKnown RBP13.07□□□□□ -0.32
COL27A1-203ENST00000468565 C1GALT1C1Q96EU7 318 aa13.07□□□□□ -0.32
COL27A1-203ENST00000468565 AURKBQ96GD4 344 aaPredicted RBP13.07□□□□□ -0.32
COL27A1-203ENST00000468565 TUBA1CQ9BQE3 449 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms