RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 COPS7BQ9H9Q2 264 aaPredicted RBP3.64□□□□□ -1.83
SSR3-204ENST00000467733 PARVBQ9HBI1 364 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 LYRM4Q9HD34 91 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 CHRAC1Q9NRG0 131 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 FAIMQ9NVQ4 179 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 INTS10Q9NVR2 710 aaKnown RBP3.64□□□□□ -1.83
SSR3-204ENST00000467733 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 DHRS7Q9Y394 339 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 ZNF175Q9Y473 711 aa3.64□□□□□ -1.83
SSR3-204ENST00000467733 SYCE3A1L190 88 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 LRIT2A6NDA9 550 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 GOLGA8KD6RF30 607 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 E7EVH7 732 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 GOLGA8TH3BQL2 631 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CDC7O00311 574 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 FGF17O60258 216 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 NDUFB8O95169 186 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CCDC166P0CW27 439 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 FCGR2AP12318 317 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 HOXB9P17482 250 aaPredicted RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 PSMB1P20618 241 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 GSTM2P28161 218 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 NMBRP28336 390 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 SRD5A2P31213 254 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 HPDP32754 393 aaPredicted RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 DEKP35659 375 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 SRP14P37108 136 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 CETN2P41208 172 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 STARP49675 285 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 RGS4P49798 205 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 PLA2G16P53816 162 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CDH11P55287 796 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 AP1S2P56377 157 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 IRX1P78414 480 aaPredicted RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 ALKBH1Q13686 389 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 RBBP5Q15291 538 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 BCL2A1Q16548 175 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 ZNF585BQ52M93 769 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 PIK3CD-AS1Q5SR53 167 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 AGAP6Q5VW22 663 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 C11orf71Q6IPW1 123 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 TRIM40Q6P9F5 258 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 SASS6Q6UVJ0 657 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 GSG1LQ6UXU4 331 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 TMEM64Q6YI46 380 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CENPUQ71F23 418 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CHMP1BQ7LBR1 199 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 IGFN1Q86VF2 1251 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 OR2L5Q8NG80 312 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 OR6K3Q8NGY3 331 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CCT6BQ92526 530 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 KAT2AQ92830 837 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 SLC25A28Q96A46 364 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 FBXL8Q96CD0 374 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 GPR21Q99679 349 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 NPAS1Q99742 590 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 KIFC1Q9BW19 673 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CACNG6Q9BXT2 260 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 IL22Q9GZX6 179 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 CCDC68Q9H2F9 335 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 RNF122Q9H9V4 155 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 SEPSECSQ9HD40 501 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 SAYSD1Q9NPB0 183 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 NGBQ9NPG2 151 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 FANCFQ9NPI8 374 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 ARL15Q9NXU5 204 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 TAS2R10Q9NYW0 307 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 SELENONQ9NZV5 590 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 EXO1Q9UQ84 846 aaKnown RBP3.63□□□□□ -1.83
SSR3-204ENST00000467733 B3GALT5Q9Y2C3 310 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 SNX8Q9Y5X2 465 aa3.63□□□□□ -1.83
SSR3-204ENST00000467733 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 UQCRHLA0A096LP55 91 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 IQANK1A0A1B0GTG1 560 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 C2orf92A0A1B0GVN3 265 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 PABPN1LA6NDY0 278 aaKnown RBP3.62□□□□□ -1.83
SSR3-204ENST00000467733 TMEM247A6NEH6 219 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 SHISA9B4DS77 424 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 ZNF814B7Z6K7 855 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 H7C417 338 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 ICOSLGO75144 302 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 CBR3O75828 277 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 SCELO95171 688 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 TBX6O95947 436 aaPredicted RBP3.62□□□□□ -1.83
SSR3-204ENST00000467733 HLA-DQA2P01906 255 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 CLPSP04118 112 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 APRTP07741 180 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 ABCD3P28288 659 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 PTGDSP41222 190 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 B3GALT5-AS1P59052 145 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 HERVK_113P63132 956 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 ERVK-8P63133 956 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 BSPH1Q075Z2 132 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 TGM3Q08188 693 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 SCGB2A2Q13296 93 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 BIKQ13323 160 aa3.62□□□□□ -1.83
SSR3-204ENST00000467733 SNTA1Q13424 505 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms