RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 BHLHE22Q8NFJ8 381 aaPredicted RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 ZPLD1Q8TCW7 415 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 FIG4Q92562 907 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 SDCCAG3Q96C92 435 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 KLHL15Q96M94 604 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 ALG2Q9H553 416 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 A0A0J9YW62 118 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 M0R3H8 397 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 CXCL13O43927 109 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 GMNNO75496 209 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 IL2RAP01589 272 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 RNF224P0DH78 156 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 TCN1P20061 433 aaPredicted RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 SHC1P29353 583 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 TACR3P29371 465 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 KDELR2P33947 212 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 APOBEC1P41238 236 aaKnown RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 HTR3AP46098 478 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 DUSP7Q16829 419 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 NSUN5P2Q63ZY6 315 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 HBMQ6B0K9 141 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 WBP2NLQ6ICG8 309 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 C3orf33Q6P1S2 294 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 CCDC80Q76M96 950 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 GGNQ86UU5 652 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 LACC1Q8IV20 430 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 CCDC71Q8IV32 467 aaPredicted RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 DEFB107AQ8IZN7 70 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 PGAM4Q8N0Y7 254 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 OR52E4Q8NGH9 312 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 OR2V1Q8NHB1 315 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 VANGL1Q8TAA9 524 aaPredicted RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 PHF10Q8WUB8 498 aaKnown RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 RASSF5Q8WWW0 418 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 OSTF1Q92882 214 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 DNAJA3Q96EY1 480 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 OR5B2Q96R09 309 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 RSPO3Q9BXY4 272 aaPredicted RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 CALHM2Q9HA72 323 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 NDE1Q9NXR1 346 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
UBA3-209ENST00000466763 SPIN1Q9Y657 262 aaPredicted RBP12.5□□□□□ -0.41
UBA3-209ENST00000466763 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
UBA3-209ENST00000466763 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 KIAA1549Q9HCM3 1950 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 TMED7-TICAM2A0A0A6YYA0 188 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 A0A1W2PNR3 127 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CD8B2A6NJW9 211 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 FAAHO00519 579 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CXCR6O00574 342 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 SYNGR4O95473 234 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 NTN1O95631 604 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 NCK1P16333 377 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CALB2P22676 271 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CXCR1P25024 350 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 SLC1A3P43003 542 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 KCNJ5P48544 419 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CARD18P57730 90 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CYBRD1Q53TN4 286 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 RANBP3LQ86VV4 465 aaPredicted RBP12.49□□□□□ -0.41
UBA3-209ENST00000466763 LSRQ86X29 649 aaPredicted RBP12.49□□□□□ -0.41
UBA3-209ENST00000466763 TNIP2Q8NFZ5 429 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 GPR32P1Q8NGA4 272 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 OR10D3Q8NH80 312 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 PROX1Q92786 737 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 FAM162AQ96A26 154 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 TPD52L3Q96J77 140 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 SELENONQ9NZV5 590 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 ABCD2Q9UBJ2 740 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 CHRNA9Q9UGM1 479 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 RNF6Q9Y252 685 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 TMED7Q9Y3B3 224 aa12.49□□□□□ -0.41
UBA3-209ENST00000466763 SPTBN1Q01082 2364 aaKnown RBP12.49□□□□□ -0.41
UBA3-209ENST00000466763 A1L4Q6 167 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 ETV2O00321 342 aaPredicted RBP12.48□□□□□ -0.41
UBA3-209ENST00000466763 ZNF682O95780 498 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 LGI1O95970 557 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 FESP07332 822 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 CD247P20963 164 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 PON3Q15166 354 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
UBA3-209ENST00000466763 RIPPLY2Q5TAB7 128 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 CLEC18BQ6UXF7 455 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 RINLQ6ZS11 566 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 SEM1Q6ZVN7 128 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 ADGRG3Q86Y34 549 aa12.48□□□□□ -0.41
UBA3-209ENST00000466763 ZNF808Q8N4W9 903 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms