RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 OR10D3Q8NH80 312 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC25A43Q8WUT9 341 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 FIG4Q92562 907 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF845Q96IR2 970 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SH3GL1Q99961 368 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SPOCK3Q9BQ16 436 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 GPATCH1Q9BRR8 931 aaKnown RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 PINK1Q9BXM7 581 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 TRIM8Q9BZR9 551 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 UCK2Q9BZX2 261 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 COQ10BQ9H8M1 238 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 EVA1AQ9H8M9 152 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 KCNJ16Q9NPI9 418 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 NPDC1Q9NQX5 325 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 RLIMQ9NVW2 624 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF232Q9UNY5 417 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 BOLA1Q9Y3E2 137 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 LOC100653049A0A140TA62 436 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 A0A1W2PNV4 684 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 NKX2-6A6NCS4 301 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SYT5O00445 386 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 TNFSF11O14788 317 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF208O43345 1280 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SHOX2O60902 331 aaPredicted RBP8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 KRT34O76011 436 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 AQP8O94778 261 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 MFN2O95140 757 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 COX4I1P13073 169 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 UQCRBP14927 111 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 COL8A1P27658 744 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PRDX6P30041 224 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PCGF2P35227 344 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC1A3P43003 542 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 IDH2P48735 452 aaKnown RBP8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 RAC3P60763 192 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 FOXF2Q12947 444 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PON3Q15166 354 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMEM176BQ3YBM2 270 aaPredicted RBP8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 MMEL1Q495T6 779 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PDSS1Q5T2R2 415 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 FAM91A1Q658Y4 838 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 HBMQ6B0K9 141 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SP5Q6BEB4 398 aaPredicted RBP8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PLXDC2Q6UX71 529 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 CCDC80Q76M96 950 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 CHMP1BQ7LBR1 199 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 CPLX4Q7Z7G2 160 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ADGRG3Q86Y34 549 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 KRT73Q86Y46 540 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ANKS4BQ8N8V4 417 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 OR10A6Q8NH74 314 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 FNDC9Q8TBE3 224 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SMPDL3BQ92485 455 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 OSTF1Q92882 214 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF583Q96ND8 569 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF607Q96SK3 696 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC39A3Q9BRY0 314 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SPATA5L1Q9BVQ7 753 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PIGMQ9H3S5 423 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ARMC7Q9H6L4 198 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMEM185BQ9H7F4 350 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 GP6Q9HCN6 339 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 CTPS2Q9NRF8 586 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 SERINC1Q9NRX5 453 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 GID8Q9NWU2 228 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 CHRNA9Q9UGM1 479 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 ANGPT4Q9Y264 503 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 AP3M1Q9Y2T2 418 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PKDREJQ9NTG1 2253 aa8.49□□□□□ -1.05
SDCCAG3-208ENST00000466579 PRORSD1PA6NEY8 169 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 FAM90A27PA6NNH2 459 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 DNPH1O43598 174 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CXCL13O43927 109 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 TPST1O60507 370 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 FZD7O75084 574 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 SS18L1O75177 396 aaPredicted RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 SERPINB7O75635 380 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CGAP01215 116 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 C8BP07358 591 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 GKN3PP0CG01 181 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 PRG2P13727 222 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 BMP5P22003 454 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 RYKP34925 604 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 SFTPDP35247 375 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 ASCL1P50553 236 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 POLR2HP52434 150 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CRYBA2P53672 197 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CARD18P57730 90 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 DMTNQ08495 405 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 MERTKQ12866 999 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 VEZF1Q14119 521 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF239Q16600 458 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CYP51A1Q16850 503 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 VMACQ2NL98 169 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 SYT14P1Q58G82 188 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 RABL3Q5HYI8 236 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms