RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 VDAC3Q9Y277 283 aa11.04□□□□□ -0.64
VPS16-206ENST00000466415 LRRC42Q9Y546 428 aa11.04□□□□□ -0.64
VPS16-206ENST00000466415 PCDHGB6Q9Y5F9 930 aa11.04□□□□□ -0.64
VPS16-206ENST00000466415 WDFY3Q8IZQ1 3526 aa11.04□□□□□ -0.64
VPS16-206ENST00000466415 A0A087WZY1 265 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 TMED7-TICAM2A0A0A6YYA0 188 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 ENO4A6NNW6 628 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 H0YAE9 185 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 H3BN98 237 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 SAGP10523 405 aaPredicted RBP11.03□□□□□ -0.64
VPS16-206ENST00000466415 CD46P15529 392 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 PRKCAP17252 672 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 CCNA2P20248 432 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 CNR1P21554 472 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FPR3P25089 353 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 EIF2S3P41091 472 aaKnown RBP11.03□□□□□ -0.64
VPS16-206ENST00000466415 GPR4P46093 362 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 GPR85P60893 370 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 PRKCDQ05655 676 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 COX10Q12887 443 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FOXF1Q12946 379 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 KCNAB2Q13303 367 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 MED21Q13503 144 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 TOMM20Q15388 145 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 SPINK14Q6IE38 97 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 C1orf94Q6P1W5 598 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 PRICKLE2Q7Z3G6 844 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 ZER1Q7Z7L7 766 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FADS6Q8N9I5 356 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 C1GALT1C1Q96EU7 318 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 CNBD2Q96M20 576 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FRMD6Q96NE9 622 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 SIGLEC12Q96PQ1 595 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 MBOAT4Q96T53 435 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FAM173AQ9BQD7 235 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 TMEM43Q9BTV4 400 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 GABARAPL3Q9BY60 117 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 SLC19A3Q9BZV2 496 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 RNF32Q9H0A6 362 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 ZNF552Q9H707 407 aaPredicted RBP11.03□□□□□ -0.64
VPS16-206ENST00000466415 OSGIN1Q9UJX0 560 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 FBXL2Q9UKC9 423 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 LRCH1Q9Y2L9 728 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 KLF13Q9Y2Y9 288 aaPredicted RBP11.03□□□□□ -0.64
VPS16-206ENST00000466415 TMED7Q9Y3B3 224 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 SPIN1Q9Y657 262 aaPredicted RBP11.03□□□□□ -0.64
VPS16-206ENST00000466415 KCNMB2Q9Y691 235 aa11.03□□□□□ -0.64
VPS16-206ENST00000466415 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.65
VPS16-206ENST00000466415 EFCAB9A8MZ26 197 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 DLGAP1O14490 977 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 BCKDKO14874 412 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 SUSD5O60279 629 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 NEURL1O76050 574 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 OSMP13725 252 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 HK1P19367 917 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.65
VPS16-206ENST00000466415 MST1P26927 711 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 POU1F1P28069 291 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 APOBEC1P41238 236 aaKnown RBP11.02□□□□□ -0.65
VPS16-206ENST00000466415 OMPP47874 163 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 DSCR4P56555 118 aaPredicted RBP11.02□□□□□ -0.65
VPS16-206ENST00000466415 ESRRGP62508 458 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 NPRL3Q12980 569 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 INPP5JQ15735 1006 aaPredicted RBP11.02□□□□□ -0.65
VPS16-206ENST00000466415 PLPPR5Q32ZL2 321 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 NHSL2Q5HYW2 709 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 TIGD3Q6B0B8 471 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 KRT80Q6KB66 452 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 KLHL17Q6TDP4 642 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 ARSKQ6UWY0 536 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 MEX3DQ86XN8 651 aaKnown RBP11.02□□□□□ -0.65
VPS16-206ENST00000466415 P3H2Q8IVL5 708 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 PARP8Q8N3A8 854 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 C10orf53Q8N6V4 93 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 WDSUB1Q8N9V3 476 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 TEX47Q8TBZ9 253 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 TM9SF4Q92544 642 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 TFAP2CQ92754 450 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 ZBTB8AQ96BR9 441 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 BPIFA2Q96DR5 249 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 SGTBQ96EQ0 304 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 MRGPRX4Q96LA9 322 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 KLHDC3Q9BQ90 382 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 ZNF426Q9BUY5 554 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 ADAM19Q9H013 955 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 KLHL1Q9NR64 748 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 SERINC1Q9NRX5 453 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 FAM118AQ9NWS6 357 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 B4GALT7Q9UBV7 327 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 GMPPBQ9Y5P6 360 aa11.02□□□□□ -0.65
VPS16-206ENST00000466415 AHCTF1Q8WYP5 2266 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 LOC100130705A0A1B0GUX0 176 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 A0A1W2PRS3 328 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 HTR3EA5X5Y0 456 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 UNC119BA6NIH7 251 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms