RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 PLEKHM3Q6ZWE6 761 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OVCH1Q7RTY7 1134 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 GRAMD2AQ8IUY3 354 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 PRSS58Q8IYP2 241 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OR9Q2Q8NGE9 314 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OR4D11Q8NGI4 311 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 TUBA1CQ9BQE3 449 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 CNPPD1Q9BV87 410 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 YIPF2Q9BWQ6 316 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OR10A5Q9H207 317 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 WDR54Q9H977 334 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 MRTO4Q9UKD2 239 aaKnown RBP12.64□□□□□ -0.39
HDAC6-215ENST00000465457 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 SCN2AQ99250 2005 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 TCRBV16S1A1N1A0A5B0 115 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 CDHR4A6H8M9 788 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 C17orf105B2RV13 164 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 SLC1A7O00341 560 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 WDPCPO95876 746 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 CD63P08962 238 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 OSMP13725 252 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 KLK2P20151 261 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 SMSP52788 366 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 PSG6Q00889 435 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 CDK5R2Q13319 367 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 PIN1Q13526 163 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 MAD2L1BPQ15013 274 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 GPR68Q15743 365 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 NPTX1Q15818 432 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 DECR1Q16698 335 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 FLYWCH1Q4VC44 716 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 C3P1Q6ZMU1 363 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 DGAT2L6Q6ZPD8 337 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 WDR53Q7Z5U6 358 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 TGIF2LYQ8IUE0 185 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 RBM45Q8IUH3 476 aaKnown RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 LACC1Q8IV20 430 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF615Q8N8J6 731 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 SLC7A13Q8TCU3 470 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 IPCEF1Q8WWN9 437 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 PIK3R3Q92569 461 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 DIO2Q92813 273 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 DAZLQ92904 295 aaKnown RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 NACC2Q96BF6 587 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 DGCR14Q96DF8 476 aaKnown RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 MCHR1Q99705 422 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 RSPO3Q9BXY4 272 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 HOXD1Q9GZZ0 328 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 SLC26A1Q9H2B4 701 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 NECTIN3Q9NQS3 549 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-215ENST00000465457 RLIMQ9NVW2 624 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 IMPAD1Q9NX62 359 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 ERVK-19Q9WJR5 959 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 MEMO1Q9Y316 297 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 MAU2Q9Y6X3 613 aa12.63□□□□□ -0.39
HDAC6-215ENST00000465457 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 IGLV3-12A0A075B6K2 115 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 TMEM200CA6NKL6 621 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 OR6C76A6NM76 312 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 ABCB7O75027 752 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CYP7B1O75881 506 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 ONECUT2O95948 504 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 HPP00738 406 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 GASTP01350 101 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 COX6A1P12074 109 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 JUNBP17275 347 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-215ENST00000465457 ELK4P28324 431 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 SSTR4P31391 388 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CRISP1P54107 249 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 RHAGQ02094 409 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF141Q15928 474 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 MEP1AQ16819 746 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CTU2Q2VPK5 515 aaKnown RBP12.62□□□□□ -0.39
HDAC6-215ENST00000465457 MINDY4Q4G0A6 757 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 MFSD4BQ5TF39 518 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 C1orf94Q6P1W5 598 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 PODNL1Q6PEZ8 512 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 KLHL17Q6TDP4 642 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 RRM2BQ7LG56 351 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 SATL1Q86VE3 508 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 COMTD1Q86VU5 262 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 P3H2Q8IVL5 708 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 ALDH16A1Q8IZ83 802 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 SIMC1Q8NDZ2 872 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 OR4K5Q8NGD3 323 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 C16orf52Q8NHV5 167 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 PIGXQ8TBF5 258 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms