RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	ASCL1	P50553	236 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	GMFB	P60983	142 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	MZT1	Q08AG7	82 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	TAF10	Q12962	218 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	PLD1	Q13393	1074 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ZMYND11	Q15326	602 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	TGIF1	Q15583	401 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	C2orf76	Q3KRA6	126 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	KRTAP24-1	Q3LI83	254 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	DCAF4L1	Q3SXM0	396 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	UGT3A2	Q3SY77	523 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	DNAL1	Q4LDG9	190 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ZRANB3	Q5FWF4	1079 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	HES5	Q5TA89	166 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ELP2	Q6IA86	826 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	PRR27	Q6MZM9	219 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	IYD	Q6PHW0	289 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	CLEC2A	Q6UVW9	174 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	SUSD1	Q6UWL2	747 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ADCK2	Q7Z695	626 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	KLHDC8B	Q8IXV7	354 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ELMOD2	Q8IZ81	293 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	LGI2	Q8N0V4	545 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	CLYBL	Q8N0X4	340 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	OR8H3	Q8N146	312 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	METTL13	Q8N6R0	699 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ZNF611	Q8N823	705 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ANKFN1	Q8N957	763 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ICA1L	Q8NDH6	482 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	HEXDC	Q8WVB3	486 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	RBMXL1	Q96E39	390 aa	Known RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	C14orf79	Q96F83	325 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	HES6	Q96HZ4	224 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	C18orf12	Q96KH6	178 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	NSMCE2	Q96MF7	247 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	LRRC3B	Q96PB8	259 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	XPO6	Q96QU8	1125 aa	Known RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	CCDC3	Q9BQI4	270 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	FAM213A	Q9BRX8	229 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	KATNB1	Q9BVA0	655 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	ACAT2	Q9BWD1	397 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	KRTAP1-5	Q9BYS1	174 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	SLC2A11	Q9BYW1	496 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	CDH20	Q9HBT6	801 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	SLC52A3	Q9NQ40	469 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	FAM114A2	Q9NRY5	505 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	GKN1	Q9NS71	199 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	RBAK	Q9NYW8	714 aa	Predicted RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	STX18	Q9P2W9	335 aa	Known RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	BAIAP2L1	Q9UHR4	511 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	SPATA2	Q9UM82	520 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	TP53TG5	Q9Y2B4	290 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	RP1	P56715	2156 aa		4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278	TDRD6	O60522	2096 aa	Known RBP	4.41	□□□□□ -1.7
CACNA1C-223	ENST00000465278		A0A1W2PPW3	197 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NCF1B	A6NI72	391 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZNF98	A6NK75	572 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NCF1C	A8MVU1	366 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EVPLL	A8MZ36	301 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PIR	O00625	290 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CLDN4	O14493	209 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NUDT21	O43809	227 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GPRIN2	O60269	458 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SMPD2	O60906	423 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RNASEH1	O60930	286 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CS	O75390	466 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CRCP	O75575	148 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OTC	P00480	354 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	INHBA	P08476	426 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ERVK-10	P10266	1014 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HAPLN1	P10915	354 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CCDC130	P13994	396 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CYP11B1	P15538	503 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CCNA2	P20248	432 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EFNA1	P20827	205 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACP1	P24666	158 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PTAFR	P25105	342 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GIF	P27352	417 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MAT2A	P31153	395 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NUP62	P37198	522 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TALDO1	P37837	337 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACAA2	P42765	397 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MAGEA1	P43355	309 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RPL34	P49207	117 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ARHGDIA	P52565	204 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MFAP3	P55082	362 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GPX6	P59796	221 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACTR1A	P61163	376 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	YWHAE	P62258	255 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GNGT1	P63211	74 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	INCA1	Q0VD86	236 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZNF273	Q14593	569 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ITIH4	Q14624	930 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HYAL4	Q2M3T9	481 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KIAA1644	Q3SXP7	199 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LBH	Q53QV2	105 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	YIF1B	Q5BJH7	314 aa		4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms