RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 PEPDP12955 493 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF17P17021 662 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 AQP1P29972 269 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 RYKP34925 604 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 EIF1P41567 113 aaKnown RBP15.95■□□□□ 0.14
COL7A1-205ENST00000465238 SLC6A8P48029 635 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 CPA2P48052 419 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 STARP49675 285 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 GZMMP51124 257 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 VMACQ2NL98 169 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 INTS11Q5TA45 600 aaKnown RBP15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ERICH5Q6P6B1 374 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF836Q6ZNA1 936 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF440Q8IYI8 595 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 GTPBP8Q8N3Z3 284 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-205ENST00000465238 FITM2Q8N6M3 262 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 FAM71CQ8NEG0 241 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 MBD3L2Q8NHZ7 208 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF563Q8TA94 476 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 TRIB1Q96RU8 372 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 KLHDC3Q9BQ90 382 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 CXXC4Q9H2H0 198 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 CALHM2Q9HA72 323 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ARL8BQ9NVJ2 186 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ST6GALNAC2Q9UJ37 374 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF337Q9Y3M9 751 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 GPC6Q9Y625 555 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-205ENST00000465238 KIAA1549Q9HCM3 1950 aa15.95■□□□□ 0.14
COL7A1-205ENST00000465238 C7orf72A4D263 438 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 CDHR4A6H8M9 788 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 PRORSD1PA6NEY8 169 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 A6NNC1 897 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 SHISA8B8ZZ34 492 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 H3BML4 177 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 BCAS1O75363 584 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-205ENST00000465238 CPN1P15169 458 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 CTSSP25774 331 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 PCGF2P35227 344 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 OPRM1P35372 400 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 PSME3P61289 254 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 EEF1A1P68104 462 aaKnown RBP15.94■□□□□ 0.14
COL7A1-205ENST00000465238 SRYQ05066 204 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 KRT72Q14CN4 511 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 QPRTQ15274 297 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 TOMM34Q15785 309 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-205ENST00000465238 BCL2A1Q16548 175 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 TMEM44Q2T9K0 475 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 DCST1Q5T197 706 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 RNF220Q5VTB9 566 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 PATL1Q86TB9 770 aaKnown RBP15.94■□□□□ 0.14
COL7A1-205ENST00000465238 CALHM3Q86XJ0 350 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 KIF18BQ86Y91 864 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 SLC15A3Q8IY34 581 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 FBXO27Q8NI29 283 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 ZPLD1Q8TCW7 415 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 TMEM234Q8WY98 164 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 REXO5Q96IC2 774 aaKnown RBP15.94■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF583Q96ND8 569 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 CCM2LQ9NUG4 571 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-205ENST00000465238 RLIMQ9NVW2 624 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 CMTM6Q9NX76 183 aa15.94■□□□□ 0.14
COL7A1-205ENST00000465238 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 CCT8L1PA6NM43 557 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 H0Y3Z8 333 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 DNAJA2O60884 412 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 IL18BPO95998 194 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 UQCRBP14927 111 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 PRKCAP17252 672 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 ADH6P28332 368 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 PRKAR1BP31321 381 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 LHX2P50458 406 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 MNAT1P51948 309 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 SLC7A2P52569 658 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 DAZAP2Q15038 168 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-205ENST00000465238 ARMC8Q8IUR7 673 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 GRAMD2AQ8IUY3 354 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 CLIP4Q8N3C7 705 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 MEIOBQ8N635 442 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 BHLHE22Q8NFJ8 381 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-205ENST00000465238 OR2T12Q8NG77 320 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 POC1BQ8TC44 478 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 ST8SIA1Q92185 356 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 SMPDL3BQ92485 455 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 MRGPRX4Q96LA9 322 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 RNF145Q96MT1 663 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 AP4B1Q9Y6B7 739 aa15.93■□□□□ 0.14
COL7A1-205ENST00000465238 NIPBLQ6KC79 2804 aaeCLIP15.93■□□□□ 0.14
COL7A1-205ENST00000465238 ACANP16112 2415 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 CFAP73A6NFT4 308 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 TUBAL3A6NHL2 446 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 FAM220BPB1ANY3 271 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 M0QX08 132 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 ZNF708P17019 499 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 ME2P23368 584 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 CLDN18P56856 261 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 PCBP3P57721 371 aaKnown RBP15.92■□□□□ 0.14
COL7A1-205ENST00000465238 EEFSECP57772 596 aaKnown RBP15.92■□□□□ 0.14
COL7A1-205ENST00000465238 SESN3P58005 492 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 MXRA7P84157 204 aa15.92■□□□□ 0.14
COL7A1-205ENST00000465238 SORDQ00796 357 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms