RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ASCL5Q7RTU5 278 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 ZAR1Q86SH2 424 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 ANKK1Q8NFD2 765 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 OR14A16Q8NHC5 309 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF721Q8TF20 911 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 SNRNP27Q8WVK2 155 aaKnown RBP13.35□□□□□ -0.27
COL5A1-205ENST00000464187 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 DDA1Q9BW61 102 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 MROQ9BYG7 248 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 PRRG3Q9BZD7 231 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 POLR2J2Q9GZM3 115 aaKnown RBP13.35□□□□□ -0.27
COL5A1-205ENST00000464187 NDUFB11Q9NX14 153 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 IL20Q9NYY1 176 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 GPN3Q9UHW5 284 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-205ENST00000464187 DAPK2Q9UIK4 370 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 CARD8Q9Y2G2 431 aa13.35□□□□□ -0.27
COL5A1-205ENST00000464187 KPNA4O00629 521 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 SURF4O15260 269 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 SOX30O94993 753 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 APOL3O95236 402 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CH25HO95992 272 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CRYBB2P43320 205 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 RANBP1P43487 201 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 PPP5CP53041 499 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 RAB40BQ12829 278 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 C1DQ13901 141 aaKnown RBP13.34□□□□□ -0.27
COL5A1-205ENST00000464187 OXA1LQ15070 435 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 OR1Q1Q15612 314 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 PGGHGQ32M88 737 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 FAM198BQ6UWH4 519 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 TRMT61AQ96FX7 289 aaKnown RBP13.34□□□□□ -0.27
COL5A1-205ENST00000464187 MESP1Q9BRJ9 268 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CRB3Q9BUF7 120 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 WDR54Q9H977 334 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 SEC14L4Q9UDX3 406 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 PRODH2Q9UF12 536 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF223Q9UK11 482 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CDH10Q9Y6N8 788 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF292O60281 2723 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 C9orf172C9J069 976 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 C9J4A7 227 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 WWP2O00308 870 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 TRIM16LQ309B1 348 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 FLYWCH1Q4VC44 716 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 NPSR1Q6W5P4 371 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 ANKRD37Q7Z713 158 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CLDN22Q8N7P3 220 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 OR4N2Q8NGD1 307 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 PPP1R14BQ96C90 147 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 ART5Q96L15 291 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 EXOSC4Q9NPD3 245 aaKnown RBP13.34□□□□□ -0.27
COL5A1-205ENST00000464187 NXT1Q9UKK6 140 aaKnown RBP13.34□□□□□ -0.27
COL5A1-205ENST00000464187 STUB1Q9UNE7 303 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 CFL2Q9Y281 166 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 NUP210LQ5VU65 1888 aa13.34□□□□□ -0.27
COL5A1-205ENST00000464187 IRGMA1A4Y4 181 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 KCNK2O95069 426 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 CT45A8P0DMV1 189 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 CT45A9P0DMV2 189 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 MTNR1AP48039 350 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 NNATQ16517 81 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 CT45A2Q5DJT8 189 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 TMEM164Q5U3C3 297 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 FAM69BQ5VUD6 431 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 AADACL4Q5VUY2 407 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 LIPKQ5VXJ0 399 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 TUBA3EQ6PEY2 450 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 ZNF554Q86TJ5 538 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 PHC2Q8IXK0 858 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 PFN4Q8NHR9 129 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 SAMD8Q96LT4 415 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 SLC46A1Q96NT5 459 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 Q9N2J8 555 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 KRCC1Q9NPI7 259 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-205ENST00000464187 POLE3Q9NRF9 147 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 IL20RAQ9UHF4 553 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 KNTC1P50748 2209 aa13.33□□□□□ -0.28
COL5A1-205ENST00000464187 TMEM129A0AVI4 362 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 FUOMA2VDF0 154 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 SNTNA6NMZ2 147 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 TAF4O00268 1085 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 FMO6PO60774 539 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 CPEP16870 476 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 MYL12AP19105 171 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 MAKP20794 623 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 SOX6P35712 828 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 CDH11P55287 796 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 WNT4P56705 351 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 GDPGP1Q6ZNW5 385 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 SHFQ7M4L6 423 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 PMM1Q92871 262 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 NUDT9Q9BW91 350 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 ASPNQ9BXN1 380 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 DPH1Q9BZG8 443 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 MED17Q9NVC6 651 aa13.32□□□□□ -0.28
COL5A1-205ENST00000464187 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms