RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 OR9A4Q8NGU2 314 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 SLC38A5Q8WUX1 472 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 TSLPQ969D9 159 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 RAD51AP1Q96B01 352 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 TM4SF19Q96DZ7 209 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 QKIQ96PU8 341 aaKnown RBP eCLIP4.28□□□□□ -1.72
COPS3-204ENST00000462236 PAFAH2Q99487 392 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 DDOQ99489 341 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 LPAR4Q99677 370 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 LRRC1Q9BTT6 524 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 DEFB127Q9H1M4 99 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 SLCO5A1Q9H2Y9 848 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 CHMP1AQ9HD42 196 aaPredicted RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 SPATA7Q9P0W8 599 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 KLHL8Q9P2G9 620 aaPredicted RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 UVRAGQ9P2Y5 699 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 MALT1Q9UDY8 824 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 ZNF223Q9UK11 482 aaPredicted RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 PCDHGB1Q9Y5G3 927 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 KCNE1BA0A087WTH5 132 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 A0A1B0GUV1 79 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 OR51F1A6NGY5 319 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 TUBAL3A6NHL2 446 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 A8MV72 311 aaPredicted RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 HACD1B0YJ81 288 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 CLGNO14967 610 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 ADAM20O43506 726 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 HCN1O60741 890 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 SMPD2O60906 423 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 LDB3O75112 727 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 VPS26AO75436 327 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 EPPINO95925 133 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 OR56A5P0C7T3 313 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 HLA-DOBP13765 273 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 GABRA1P14867 456 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 IL10P22301 178 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 PSMB4P28070 264 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 LOXP28300 417 aaPredicted RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 CMPK1P30085 196 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 OPRM1P35372 400 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 TIMP3P35625 211 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 AHRP35869 848 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 SSR1P43307 286 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 BDKRB1P46663 353 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 PPIAP62937 165 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 ACVR1Q04771 509 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 PRDX1Q06830 199 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 ABRAXAS2Q15018 415 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 NDUFA9Q16795 377 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 KRTAP24-1Q3LI83 254 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 ALKBH5Q6P6C2 394 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 TAS2R42Q7RTR8 314 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 LDB1Q86U70 411 aaPredicted RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 LINC00346Q8IVM7 164 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 CYP4Z2PQ8N1L4 340 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 TMEM251Q8N6I4 163 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 ZNF441Q8N8Z8 693 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 TSPAN14Q8NG11 270 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 OR13J1Q8NGT2 312 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 LINC01560Q8TB33 94 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 ASZ1Q8WWH4 475 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 SLC44A1Q8WWI5 657 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 SYN2Q92777 582 aaPredicted RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 PHF21AQ96BD5 680 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 NTNG2Q96CW9 530 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 ERP27Q96DN0 273 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 SPATA13Q96N96 652 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 SECISBP2Q96T21 854 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 APOL2Q9BQE5 337 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 TTTY12Q9BZ98 90 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 PPIL3Q9H2H8 161 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 LRMDAQ9H2I8 198 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 EVA1AQ9H8M9 152 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 MRPS30Q9NP92 439 aaKnown RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 SPRR3Q9UBC9 169 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 ZNF629Q9UEG4 869 aaPredicted RBP4.27□□□□□ -1.73
COPS3-204ENST00000462236 RSPH14Q9UHP6 348 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 LCMT1Q9UIC8 334 aa4.27□□□□□ -1.73
COPS3-204ENST00000462236 CCDC162PA2VCL2 907 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 OR2M5A3KFT3 312 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CTAGE9A4FU28 777 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 FAM166BA8MTA8 275 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 IQCF5A8MTL0 148 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 SMTNL1A8MU46 457 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 DEFB108AA8MXU0 73 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 SGK494L7N484 410 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 HAT1O14929 419 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 PHF1O43189 567 aaPredicted RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 PRKNO60260 465 aaPredicted RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 KIF5CO60282 957 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CST8O60676 142 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CTAGE8P0CG41 777 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CDH1P12830 882 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 IL1RNP18510 177 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 MSNP26038 577 aaKnown RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 NMBRP28336 390 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 MAGEA5P43359 124 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 TNNT3P45378 269 aaPredicted RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 GAS1P54826 345 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CSE1LP55060 971 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms