RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PLAURQ03405 335 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 TFF3Q07654 80 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 EPS8Q12929 822 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SELPLGQ14242 412 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 GTF2IRD2BQ6EKJ0 949 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 GTF2IRD2Q86UP8 949 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 MCEMP1Q8IX19 187 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 C10orf111Q8N326 155 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 C11orf65Q8NCR3 313 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 HIPK4Q8NE63 616 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC25A43Q8WUT9 341 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 RNASE6Q93091 150 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 CPNE4Q96A23 557 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF524Q96C55 264 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 LRRC58Q96CX6 371 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 OR5B2Q96R09 309 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF607Q96SK3 696 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SH3GL1Q99961 368 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SPOCK3Q9BQ16 436 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 TRIM8Q9BZR9 551 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 PIGMQ9H3S5 423 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 RNF122Q9H9V4 155 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 CTPS2Q9NRF8 586 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 RLIMQ9NVW2 624 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 FOXD3Q9UJU5 478 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC13A4Q9UKG4 626 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 UTP20O75691 2785 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 TMED7-TICAM2A0A0A6YYA0 188 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 A0A1W2PNV4 684 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 PRORSD1PA6NEY8 169 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 FAAHO00519 579 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 SERPINB7O75635 380 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 SMNDC1O75940 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 AQP8O94778 261 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 NPPAP01160 153 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CCNA2P20248 432 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 DRD4P21917 467 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 FKBP2P26885 142 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 AQP1P29972 269 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CPA2P48052 419 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 POLR2HP52434 150 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 DLX5P56178 289 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CTBP2P56545 445 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 RBBP4Q09028 425 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 SYT14P1Q58G82 188 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 MTDHQ86UE4 582 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC30A8Q8IWU4 369 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CLIP4Q8N3C7 705 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CADM2Q8N3J6 435 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 POU5F2Q8N7G0 328 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 BHLHE22Q8NFJ8 381 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 OR10A6Q8NH74 314 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 RP9Q8TA86 221 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 ROBO4Q8WZ75 1007 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 ECSITQ9BQ95 431 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CCDC106Q9BWC9 280 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 ENKD1Q9H0I2 346 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 CHRNA9Q9UGM1 479 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 PRDM4Q9UKN5 801 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 PACSIN3Q9UKS6 424 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 TMED7Q9Y3B3 224 aa9.49□□□□□ -0.89
TRAPPC12-213ENST00000461577 SYT5O00445 386 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 SNX3O60493 162 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 ADAM11O75078 769 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 TNFSF13O75888 250 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 COX4I1P13073 169 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 ENPP1P22413 925 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 TACR3P29371 465 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 PRKAR1BP31321 381 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 PEX19P40855 299 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC1A3P43003 542 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 RAC3P60763 192 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 CSNK2A1P68400 391 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 ADRM1Q16186 407 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF239Q16600 458 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 FBXL19-AS1Q494R0 122 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 INTS11Q5TA45 600 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 WBP2NLQ6ICG8 309 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 NANOGP8Q6NSW7 305 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 VWA1Q6PCB0 445 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 DHRS4L2Q6PKH6 230 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 NET1Q7Z628 596 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 LUZP2Q86TE4 346 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 SERPINA11Q86U17 422 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 KIF18BQ86Y91 864 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 PTOV1Q86YD1 416 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 ARMC8Q8IUR7 673 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 DMRTC2Q8IXT2 367 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 OR8J3Q8NGG0 315 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC35B4Q969S0 331 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 DDIT4LQ96D03 193 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 RCN3Q96D15 328 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 GMPPAQ96IJ6 420 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC39A3Q9BRY0 314 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 RBM24Q9BX46 236 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 SRXN1Q9BYN0 137 aa9.48□□□□□ -0.89
TRAPPC12-213ENST00000461577 PIF1Q9H611 641 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms