RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FAM27E3Q08E93 113 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 LARS2Q15031 903 aaKnown RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 TESK1Q15569 626 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 ZNF239Q16600 458 aaKnown RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 LRIF1Q5T3J3 769 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 GCNT6Q5T4J0 391 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 GTF2IRD2BQ6EKJ0 949 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 ZNF474Q6S9Z5 364 aaPredicted RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 GTF2IRD2Q86UP8 949 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 VRK2Q86Y07 508 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 PMM1Q92871 262 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 MAL2Q969L2 176 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 SRXN1Q9BYN0 137 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 LIME1Q9H400 295 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 COQ10BQ9H8M1 238 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 ST6GALNAC2Q9UJ37 374 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 ZNF443Q9Y2A4 671 aaPredicted RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 A0A1W2PP18 115 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ETV2O00321 342 aaPredicted RBP13.75□□□□□ -0.21
VARS-219ENST00000461328 AP3D1O14617 1153 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 DNAJA2O60884 412 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 SS18L1O75177 396 aaPredicted RBP13.75□□□□□ -0.21
VARS-219ENST00000461328 CGAP01215 116 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 NUDT7P0C024 238 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 TFPTP0C1Z6 253 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 CD8BP10966 210 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 POU2F1P14859 743 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 CCNA2P20248 432 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 POU4F3Q15319 338 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 GUSBP1Q15486 140 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 MAPK11Q15759 364 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 EXOC3L2Q2M3D2 409 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 AP1ARQ63HQ0 302 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ZNF836Q6ZNA1 936 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 FCRLAQ7L513 359 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 GRINAQ7Z429 371 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 DHDDSQ86SQ9 333 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ZNF440Q8IYI8 595 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ZNF610Q8N9Z0 462 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 OR6K3Q8NGY3 331 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 BBS10Q8TAM1 723 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ABHD3Q8WU67 409 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 NINJ1Q92982 152 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ARMC7Q9H6L4 198 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 A4GALTQ9NPC4 353 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 CTPS2Q9NRF8 586 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 GLRX2Q9NS18 164 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ELOVL5Q9NYP7 299 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 SLC25A37Q9NYZ2 338 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 VAPAQ9P0L0 249 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 SLAMF8Q9P0V8 285 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 CHRNA9Q9UGM1 479 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 ZNF232Q9UNY5 417 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
VARS-219ENST00000461328 DSPPQ9NZW4 1301 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 IGHV3-15A0A0B4J1V0 119 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 A0A0G2JPF8 293 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 CFAP73A6NFT4 308 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 HNRNPCL2B2RXH8 293 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 HNRNPCL3B7ZW38 293 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 HNRNPCL1O60812 293 aaKnown RBP13.74□□□□□ -0.21
VARS-219ENST00000461328 HNRNPCL4P0DMR1 293 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 CD1EP15812 388 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 HOXB9P17482 250 aaPredicted RBP13.74□□□□□ -0.21
VARS-219ENST00000461328 DNASE1P24855 282 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
VARS-219ENST00000461328 PCYT1AP49585 367 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 ARFIP2P53365 341 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 PLAURQ03405 335 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 RNPS1Q15287 305 aaKnown RBP13.74□□□□□ -0.21
VARS-219ENST00000461328 SYT14P1Q58G82 188 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 TMEM201Q5SNT2 666 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 METTL21CQ5VZV1 264 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 STK32CQ86UX6 486 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 NFKBIDQ8NI38 313 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 RNF128Q8TEB7 428 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 ZHX1-C8orf76Q96EF9 292 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 MED18Q9BUE0 208 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 ZNF385DQ9H6B1 395 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 C12orf49Q9H741 205 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 SLC52A3Q9NQ40 469 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 CCM2LQ9NUG4 571 aaPredicted RBP13.74□□□□□ -0.21
VARS-219ENST00000461328 RLIMQ9NVW2 624 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 KLHL28Q9NXS3 571 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 PLEKHA6Q9Y2H5 1048 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 IFT52Q9Y366 437 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 SPG11Q96JI7 2443 aa13.74□□□□□ -0.21
VARS-219ENST00000461328 CDHR4A6H8M9 788 aa13.73□□□□□ -0.21
VARS-219ENST00000461328 C16orf97H3BN30 126 aa13.73□□□□□ -0.21
VARS-219ENST00000461328 SULT2B1O00204 365 aa13.73□□□□□ -0.21
VARS-219ENST00000461328 HRGP04196 525 aa13.73□□□□□ -0.21
VARS-219ENST00000461328 THBS1P07996 1170 aa13.73□□□□□ -0.21
VARS-219ENST00000461328 GKN3PP0CG01 181 aa13.73□□□□□ -0.21
VARS-219ENST00000461328 ARAFP10398 606 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms