RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 ELK4P28324 431 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 SFTPDP35247 375 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 MSX2P35548 267 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-229ENST00000460826 SLC1A3P43003 542 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 RGS8P57771 180 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-229ENST00000460826 CBX1P83916 185 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 ADORA2A-AS1P86434 159 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 NPTX1Q15818 432 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 CTU2Q2VPK5 515 aaKnown RBP12.6□□□□□ -0.39
HDLBP-229ENST00000460826 CYBRD1Q53TN4 286 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 RPTNQ6XPR3 784 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 GRINAQ7Z429 371 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 ADGRE4PQ86SQ3 457 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 ADGRG3Q86Y34 549 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 RBM45Q8IUH3 476 aaKnown RBP12.6□□□□□ -0.39
HDLBP-229ENST00000460826 PM20D2Q8IYS1 436 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 LILRA2Q8N149 483 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 BHLHE22Q8NFJ8 381 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-229ENST00000460826 SLC26A7Q8TE54 656 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 SLC35B4Q969S0 331 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 CCDC120Q96HB5 630 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 NDE1Q9NXR1 346 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 TAS2R1Q9NYW7 299 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 OSGIN1Q9UJX0 560 aa12.6□□□□□ -0.39
HDLBP-229ENST00000460826 ICE1Q9Y2F5 2266 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 CLCA1A8K7I4 914 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 EIF1AYO14602 144 aaKnown RBP12.59□□□□□ -0.39
HDLBP-229ENST00000460826 GLI4P10075 376 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 HSD17B1P14061 328 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 GABRA1P14867 456 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 UQCRBP14927 111 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 GGT1P19440 569 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 CCNA2P20248 432 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 HTR1EP28566 365 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 TACR3P29371 465 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 NUP107P57740 925 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 SELENBP1Q13228 472 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 TMEM176BQ3YBM2 270 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-229ENST00000460826 SAMD4BQ5PRF9 694 aaKnown RBP12.59□□□□□ -0.39
HDLBP-229ENST00000460826 C6orf89Q6UWU4 347 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 B3GNT6Q6ZMB0 384 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 MEIOBQ8N635 442 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 OR6T1Q8NGN1 323 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 VANGL1Q8TAA9 524 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-229ENST00000460826 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 C3orf49Q96BT1 292 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-229ENST00000460826 ZNF845Q96IR2 970 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-229ENST00000460826 TRIB1Q96RU8 372 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 ADAM19Q9H013 955 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 COQ10BQ9H8M1 238 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 KLHL28Q9NXS3 571 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 SLC13A4Q9UKG4 626 aa12.59□□□□□ -0.39
HDLBP-229ENST00000460826 COL12A1Q99715 3063 aa12.58□□□□□ -0.39
HDLBP-229ENST00000460826 TMED7-TICAM2A0A0A6YYA0 188 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 TMEM72A0PK05 275 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 TNFSF11O14788 317 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 ZG16O60844 167 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 TOXO94900 526 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 AGFG2O95081 481 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 LDLRP01130 860 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 C8BP07358 591 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 ME2P23368 584 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 PTGER4P35408 488 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 APOBEC1P41238 236 aaKnown RBP12.58□□□□□ -0.4
HDLBP-229ENST00000460826 POLR2HP52434 150 aaKnown RBP12.58□□□□□ -0.4
HDLBP-229ENST00000460826 COPZ1P61923 177 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 PMPCAQ10713 525 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 FXNQ16595 210 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 NSUN5P2Q63ZY6 315 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 GLYATQ6IB77 296 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 WBP2NLQ6ICG8 309 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 VTCN1Q7Z7D3 282 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 TSPYL5Q86VY4 417 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-229ENST00000460826 FAM26EQ8N5C1 309 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 PHF10Q8WUB8 498 aaKnown RBP12.58□□□□□ -0.4
HDLBP-229ENST00000460826 DNAJA3Q96EY1 480 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 KLHL15Q96M94 604 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 PCDHAC1Q9H158 963 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 CLCF1Q9UBD9 225 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 TESQ9UGI8 421 aaKnown RBP12.58□□□□□ -0.4
HDLBP-229ENST00000460826 CHRNA9Q9UGM1 479 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 TMED7Q9Y3B3 224 aa12.58□□□□□ -0.4
HDLBP-229ENST00000460826 A0A1B0GWA3 101 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 A0A1W2PNR3 127 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 ADAMDEC1O15204 470 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 CXCL13O43927 109 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 TGM6O95932 706 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 SERPINA1P01009 418 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 IFNA14P01570 189 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-229ENST00000460826 HTR3AP46098 478 aa12.57□□□□□ -0.4
HDLBP-229ENST00000460826 EIF1AXP47813 144 aaKnown RBP12.57□□□□□ -0.4
HDLBP-229ENST00000460826 BNIP1Q12981 228 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms