RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 OR4M2Q8NGB6 313 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 UTP15Q8TED0 518 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 TFB1MQ8WVM0 346 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 PYCR2Q96C36 320 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 LRRC45Q96CN5 670 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 MUCL1Q96DR8 90 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 GMPPAQ96IJ6 420 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 RNF157Q96PX1 679 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 FYTTD1Q96QD9 318 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 FRG2BQ96QU4 278 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 GPA33Q99795 319 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 INPP5KQ9BT40 448 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 PRRG4Q9BZD6 226 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 PCBD2Q9H0N5 130 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 GANQ9H2C0 597 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 METTL7AQ9H8H3 244 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 CCDC177Q9NQR7 707 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 TAS2R16Q9NYV7 291 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 ZDHHC2Q9UIJ5 367 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 RWDD2AQ9UIY3 292 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 EXO1Q9UQ84 846 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 LYVE1Q9Y5Y7 322 aa3.48□□□□□ -1.85
ECHDC1-211ENST00000460558 GOLGA8QA0A0J9YX86 632 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 GOLGA8OA6NCC3 632 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 OR51F1A6NGY5 319 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 LIPT2A6NK58 231 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 GOLGA8NF8WBI6 632 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 GOLGA8RI6L899 631 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 J3QLI3 93 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 RRHO14718 337 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 PRMT5O14744 637 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SEC14L5O43304 696 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 OR1F1O43749 312 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 CTNSO60931 367 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SS18L1O75177 396 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 PSIP1O75475 530 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 GCM2O75603 506 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 AQP8O94778 261 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ETHE1O95571 254 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SYF2O95926 243 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 HLA-DQA2P01906 255 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TFP02787 698 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 OPN1MWP04001 364 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 CRYBA1P05813 215 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TUBBP07437 444 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ERCC1P07992 297 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 OPN1MW2P0DN77 364 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 OPN1MW3P0DN78 364 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 MYBL1P10243 752 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 DAOP14920 347 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 PORP16435 677 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 FERP16591 822 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ADRA2CP18825 462 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 PGCP20142 388 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 MAKP20794 623 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 PTAFRP25105 342 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ATP5DP30049 168 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SRD5A2P31213 254 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ADRA1AP35348 466 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ARL3P36405 182 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 HNF4AP41235 474 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 CLK3P49761 638 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 HNRNPFP52597 415 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 RAG2P55895 527 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 RAB38P57729 211 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 RASGEF1BQ0VAM2 473 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 WASHC5Q12768 1159 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 EFTUD2Q15029 972 aaKnown RBP eCLIP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 RPS6KA1Q15418 735 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TRIP10Q15642 601 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 STK11Q15831 433 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SGCBQ16585 318 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TPD52L1Q16890 204 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 LSM12Q3MHD2 195 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SPATS1Q496A3 300 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 PTRHD1Q6GMV3 140 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SLC30A6Q6NXT4 461 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ALKBH5Q6P6C2 394 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TMEM65Q6PI78 240 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 B3GLCTQ6Y288 498 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TMEM64Q6YI46 380 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 BZW1Q7L1Q6 419 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 BHLHA15Q7RTS1 189 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 KRT74Q7RTS7 529 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 RNF144BQ7Z419 303 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 KRT77Q7Z794 578 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 ZNF567Q8N184 647 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 GABRG1Q8N1C3 465 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SCAIQ8N9R8 606 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 FAM47BQ8NA70 645 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 C11orf65Q8NCR3 313 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 C7orf57Q8NEG2 295 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 NT5CQ8TCD5 201 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TAF15Q92804 592 aaKnown RBP eCLIP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 KLHL29Q96CT2 875 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 FBXO17Q96EF6 278 aa3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 DAZAP1Q96EP5 407 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 SENP5Q96HI0 755 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 C1orf147Q96MC9 270 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-211ENST00000460558 TBX15Q96SF7 602 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms