RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 RFC3P40938 356 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 RBM34P42696 430 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ACAA2P42765 397 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 OR1E2P47887 323 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ACTR3P61158 418 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 CSNK2A1P68400 391 aaPredicted RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 TRAM2Q15035 370 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ENTPD8Q5MY95 495 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 GTF2IRD2BQ6EKJ0 949 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 TTC33Q6PID6 262 aaPredicted RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ESPNLQ6ZVH7 1005 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 TRILQ7L0X0 811 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 VTCN1Q7Z7D3 282 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 YRDCQ86U90 279 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 GTF2IRD2Q86UP8 949 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ZDHHC21Q8IVQ6 265 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 RNF113BQ8IZP6 322 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 Q8NA96 180 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 GPR32P1Q8NGA4 272 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 STK35Q8TDR2 534 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 PHF10Q8WUB8 498 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 SLC38A4Q969I6 547 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ZNF300Q96RE9 604 aaPredicted RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 TAAR6Q96RI8 345 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 PIP5K1AQ99755 562 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 SLX1AQ9BQ83 275 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 RTN4RQ9BZR6 473 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 NDEL1Q9GZM8 345 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ADAM19Q9H013 955 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 CCM2LQ9NUG4 571 aaPredicted RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 LUZP4Q9P127 313 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 RPH3AQ9Y2J0 694 aaPredicted RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 HDGFL3Q9Y3E1 203 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 SCN2AQ99250 2005 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 CFAP47Q6ZTR5 3102 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 A0A1B0GWA3 101 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 TCRBV3S1A0A5B6 114 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 OR2M5A3KFT3 312 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 AHRRA9YTQ3 701 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 DNPH1O43598 174 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 ZIC3O60481 467 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 EIF1BO60739 113 aaKnown RBP9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 FKBP6O75344 327 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 DEAF1O75398 565 aaPredicted RBP9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 H1F0P07305 194 aaKnown RBP9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 CPN1P15169 458 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 ATP6V1B2P21281 511 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 RRM2P31350 389 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 ZNF136P52737 540 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 NUP107P57740 925 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 PMP22Q01453 160 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 SGCBQ16585 318 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 NDUFAF6Q330K2 333 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 CMPK2Q5EBM0 449 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 COLEC12Q5KU26 742 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 WIPI1Q5MNZ9 446 aaPredicted RBP9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 VASNQ6EMK4 673 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 PCSK4Q6UW60 755 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 ARSKQ6UWY0 536 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 GFRALQ6UXV0 394 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 SIAH3Q8IW03 269 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 LILRA2Q8N149 483 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 ST6GALNAC3Q8NDV1 305 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 SLC41A3Q96GZ6 507 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 BARD1Q99728 777 aaKnown RBP9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 BDH2Q9BUT1 245 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 CHID1Q9BWS9 393 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 TAPBPLQ9BX59 468 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 POTEKPQ9BYX7 375 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 REEP1Q9H902 201 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 ASF1BQ9NVP2 202 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 RIMS3Q9UJD0 308 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 AP4S1Q9Y587 144 aa9.97□□□□□ -0.81
SMNDC1-203ENST00000460483 PTPRQQ9UMZ3 2332 aa9.96□□□□□ -0.81
SMNDC1-203ENST00000460483 CCDC88CQ9P219 2028 aa9.96□□□□□ -0.81
SMNDC1-203ENST00000460483 A0A087WUJ7 227 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TMED7-TICAM2A0A0A6YYA0 188 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 A0A0B4J2E0 115 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 A0A1B0GX12 115 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 A0A1W2PRQ8 180 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TCRBV5S2A0A599 114 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 CPSF4LA6NMK7 179 aaKnown RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 H3BML4 177 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 ADAM10O14672 748 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 FRS3O43559 492 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 WDR1O75083 606 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 BCAS1O75363 584 aaPredicted RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 GADD45GO95257 159 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 AHSA1O95433 338 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 NTN1O95631 604 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 IGF2P01344 180 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TFPIP10646 304 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 FCGR2AP12318 317 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 PRG2P13727 222 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 FASP25445 335 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 MAGEA2P43356 314 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms