RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 ICOSLGO75144 302 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 PRR23D2P0DMB1 279 aaPredicted RBP9.05□□□□□ -0.96
EPB41-208ENST00000460378 IFI30P13284 250 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 IDH3GP51553 393 aaPredicted RBP9.05□□□□□ -0.96
EPB41-208ENST00000460378 LGALS4P56470 323 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 LETMD1Q6P1Q0 360 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 CYHR1Q6ZMK1 362 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 RNF175Q8N4F7 328 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 RAB1CQ92928 201 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 L3HYPDHQ96EM0 354 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 GPER1Q99527 375 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 SEMA4CQ9C0C4 833 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 FBXO34Q9NWN3 711 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 TOR4AQ9NXH8 423 aa9.05□□□□□ -0.96
EPB41-208ENST00000460378 EXO1Q9UQ84 846 aaKnown RBP9.05□□□□□ -0.96
EPB41-208ENST00000460378 AQP7O14520 342 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 PGRMC2O15173 223 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CCL3P10147 92 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CD79BP40259 229 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 PGGT1BP53609 377 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CCNJQ5T5M9 372 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 PRSS41Q7RTY9 318 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 IL17RDQ8NFM7 739 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 ATOH8Q96SQ7 321 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 ZNF175Q9Y473 711 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CORINQ9Y5Q5 1042 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 A0A087WV62 115 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 FOXS1O43638 330 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 NME6O75414 186 aaPredicted RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 CELA2AP08217 269 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 PLD6Q8N2A8 252 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 OR7D2Q96RA2 312 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 C1orf198Q9H425 327 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 SLCO1B3Q9NPD5 702 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 USE1Q9NZ43 259 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 RASD1Q9Y272 281 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 GPR52Q9Y2T5 361 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 VWA8A3KMH1 1905 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 FITM1A5D6W6 292 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 NRP2O60462 931 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 TNFRSF8P28908 595 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 SLC6A12P48065 614 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 RPS26P62854 115 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 TRIM25Q14258 630 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 TMEM205Q6UW68 189 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CCDC80Q76M96 950 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 ROBO4Q8WZ75 1007 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 GMPPAQ96IJ6 420 aaPredicted RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 NPAS2Q99743 824 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 GPATCH1Q9BRR8 931 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 SHARPINQ9H0F6 387 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 HDGFL3Q9Y3E1 203 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 RNF115Q9Y4L5 304 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 AGAP14A8MT82 685 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 MGRN1O60291 552 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 SLC6A6P31641 620 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 GALNSP34059 522 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 RPS4XP62701 263 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 MAP4K2Q12851 820 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CEACAM7Q14002 265 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 TRMT12Q53H54 448 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 MRPL14Q6P1L8 145 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 PPP1R35Q8TAP8 253 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 COG8Q96MW5 612 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CSF3RQ99062 836 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 SEMA6AQ9H2E6 1030 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 CHRNA9Q9UGM1 479 aa9.04□□□□□ -0.96
EPB41-208ENST00000460378 RBM7Q9Y580 266 aaKnown RBP9.04□□□□□ -0.96
EPB41-208ENST00000460378 MSTNO14793 375 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 RAC1P63000 192 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 CRYZQ08257 329 aaKnown RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 DLG1Q12959 904 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 NRF1Q16656 503 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 TIGD6Q17RP2 521 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 CEP78Q5JTW2 689 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 RIPPLY2Q5TAB7 128 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 RPUSD3Q6P087 351 aaKnown RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 CCDC36Q8IYA8 594 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 SPTSSAQ969W0 71 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 SLITRK2Q9H156 845 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 M0QX08 132 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 KLF11O14901 512 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 CHRNGP07510 517 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 PRG2P13727 222 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 FASP25445 335 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 TACR3P29371 465 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 GMPRP36959 345 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 SLC25A3Q00325 362 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ROR2Q01974 943 aaKnown RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 SCRN3Q0VDG4 424 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 BICRALQ6AI39 1079 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 FAM83FQ8NEG4 500 aaPredicted RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 ELP4Q96EB1 424 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 AURKBQ96GD4 344 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms