RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SYT14P1Q58G82 188 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 TTMPQ5BVD1 217 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 EPGNQ6UW88 154 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 LRRC74BQ6ZQY2 392 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 MSANTD1Q6ZTZ1 278 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 NUFIP2Q7Z417 695 aaKnown RBP16.84■□□□□ 0.29
COL5A1-203ENST00000460264 TGIF2LYQ8IUE0 185 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 CMIPQ8IY22 773 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 MIER2Q8N344 545 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 ZNF563Q8TA94 476 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 CNOT9Q92600 299 aaKnown RBP16.84■□□□□ 0.29
COL5A1-203ENST00000460264 ING1Q9UK53 422 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-203ENST00000460264 YES1P07947 543 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 KLK2P20151 261 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 PSMB1P20618 241 aaKnown RBP16.83■□□□□ 0.28
COL5A1-203ENST00000460264 LOXP28300 417 aaPredicted RBP16.83■□□□□ 0.28
COL5A1-203ENST00000460264 APOBEC1P41238 236 aaKnown RBP16.83■□□□□ 0.28
COL5A1-203ENST00000460264 DIO1P49895 249 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 MAPK11Q15759 364 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 GTDC1Q4AE62 458 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 GRINAQ7Z429 371 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 GABRG1Q8N1C3 465 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 LRRC8CQ8TDW0 803 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 WDR60Q8WVS4 1066 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 VPS33AQ96AX1 596 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 ITCHQ96J02 903 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 HS3ST6Q96QI5 342 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 PSD2Q9BQI7 771 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 TACO1Q9BSH4 297 aaKnown RBP16.83■□□□□ 0.28
COL5A1-203ENST00000460264 ACTR6Q9GZN1 396 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 RMND5AQ9H871 391 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 BCO1Q9HAY6 547 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 SLCO1B3Q9NPD5 702 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 CTPS2Q9NRF8 586 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 KLHL9Q9P2J3 617 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 CHRNA9Q9UGM1 479 aa16.83■□□□□ 0.28
COL5A1-203ENST00000460264 SETD2Q9BYW2 2564 aaPredicted RBP16.83■□□□□ 0.28
COL5A1-203ENST00000460264 ACANP16112 2415 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 C2CD3Q4AC94 2353 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 DSPPQ9NZW4 1301 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 FAM234BA2RU67 622 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 AP3D1O14617 1153 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 CYTIPO60759 359 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 GCM2O75603 506 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-203ENST00000460264 ANP32DO95626 131 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 ETFAP13804 333 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 TMPPEQ6ZT21 453 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 CXorf67Q86X51 503 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-203ENST00000460264 PMM1Q92871 262 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 AURKBQ96GD4 344 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-203ENST00000460264 TMUB1Q9BVT8 246 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 OR10A4Q9H209 315 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 MTHFD2LQ9H903 347 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-203ENST00000460264 TPT1P8Q9HAU6 139 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 P2RX2Q9UBL9 471 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 GPR52Q9Y2T5 361 aa16.82■□□□□ 0.28
COL5A1-203ENST00000460264 SPIN1Q9Y657 262 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-203ENST00000460264 ROS1P08922 2347 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 SULT2B1O00204 365 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 TGDSO95455 350 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 DBIP07108 87 aaKnown RBP16.81■□□□□ 0.28
COL5A1-203ENST00000460264 FESP07332 822 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 TFPIP10646 304 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 IDH2P48735 452 aaKnown RBP16.81■□□□□ 0.28
COL5A1-203ENST00000460264 MRPL19P49406 292 aaKnown RBP16.81■□□□□ 0.28
COL5A1-203ENST00000460264 CSNK2A1P68400 391 aaPredicted RBP16.81■□□□□ 0.28
COL5A1-203ENST00000460264 RASGEF1BQ0VAM2 473 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 GNA13Q14344 377 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 C6orf10Q5SRN2 563 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 MRPL2Q5T653 305 aaKnown RBP16.81■□□□□ 0.28
COL5A1-203ENST00000460264 ABLIM2Q6H8Q1 611 aa16.81■□□□□ 0.28
COL5A1-203ENST00000460264 DSCAMO60469 2012 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.8■□□□□ 0.28
COL5A1-203ENST00000460264 POLR3GO15318 223 aaPredicted RBP16.8■□□□□ 0.28
COL5A1-203ENST00000460264 KLF4O43474 513 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 CD99P14209 185 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 IL7RP16871 459 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 CRATP43155 626 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 IDH3AP50213 366 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 DSTNP60981 165 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 ADAM8P78325 824 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 BEX5Q5H9J7 111 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 ADGRG3Q86Y34 549 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 PEX5LQ8IYB4 626 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 STEAP2Q8NFT2 490 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 GTF2H4Q92759 462 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF300Q96RE9 604 aaPredicted RBP16.8■□□□□ 0.28
COL5A1-203ENST00000460264 EBF4Q9BQW3 602 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 OR11A1Q9GZK7 315 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 UBTD1Q9HAC8 227 aa16.8■□□□□ 0.28
COL5A1-203ENST00000460264 BEX4Q9NWD9 120 aaPredicted RBP16.8■□□□□ 0.28
COL5A1-203ENST00000460264 NF1P21359 2839 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF724A8MTY0 619 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF814B7Z6K7 855 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 FAAHO00519 579 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 PMS2P2O95744 297 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 BCHEP06276 602 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 TFPTP0C1Z6 253 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms