RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CXCR4P61073 352 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 TUBA4AP68366 448 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 MYBPC1Q00872 1141 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 DNASE1L3Q13609 305 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SSPNQ14714 243 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SEC23BQ15437 767 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 ALG10BQ5I7T1 473 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 WBP2NLQ6ICG8 309 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 LCN10Q6JVE6 187 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 FAM199XQ6PEV8 388 aaPredicted RBP8.19□□□□□ -1.1
VPS50-207ENST00000458530 KLHL17Q6TDP4 642 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CASP12Q6UXS9 341 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 NUP54Q7Z3B4 507 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 P3H2Q8IVL5 708 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 PRR22Q8IZ63 422 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SLC43A2Q8N370 569 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CLDN22Q8N7P3 220 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 ZSCAN1Q8NBB4 408 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 TSPAN14Q8NG11 270 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 OR4C3Q8NH37 302 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 FAM81AQ8TBF8 368 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CT55Q8WUE5 264 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 TMEM239Q8WW34 195 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 OSTF1Q92882 214 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 RNF31Q96EP0 1072 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 NIPSNAP1Q9BPW8 284 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 RSPO3Q9BXY4 272 aaPredicted RBP8.19□□□□□ -1.1
VPS50-207ENST00000458530 SLC19A3Q9BZV2 496 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 C12orf10Q9HB07 376 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 MMP25Q9NPA2 562 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CCNB1IP1Q9NPC3 277 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CTPS2Q9NRF8 586 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SDHAF3Q9NRP4 125 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SCN3BQ9NY72 215 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 TCFL5Q9UL49 500 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 FARSAQ9Y285 508 aaKnown RBP8.19□□□□□ -1.1
VPS50-207ENST00000458530 TPRKBQ9Y3C4 175 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 MED31Q9Y3C7 131 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 PCDHGB6Q9Y5F9 930 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 A0A1B0GWA3 101 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 PMS2P1A4D2B8 440 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ZAR1LA6NP61 321 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 M0R3G1 203 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 TP53I11O14683 189 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 MRPS14O60783 128 aaKnown RBP8.18□□□□□ -1.1
VPS50-207ENST00000458530 OR6B1O95007 311 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 TNFSF15O95150 251 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CLIC3O95833 236 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ANGPTL1O95841 491 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CLPTM1O96005 669 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 HPP00738 406 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 GASTP01350 101 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 UMODP07911 640 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 POU2F1P14859 743 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 HTR2AP28223 471 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ACAA2P42765 397 aaKnown RBP8.18□□□□□ -1.1
VPS50-207ENST00000458530 GSSP48637 474 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CCR4P51679 360 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 SMSP52788 366 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 HOXC5Q00444 222 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 FOXD4Q12950 439 aaPredicted RBP8.18□□□□□ -1.1
VPS50-207ENST00000458530 SKP2Q13309 424 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 RAPSNQ13702 412 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CBFBQ13951 182 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 C6orf141Q5SZD1 244 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 FNDC7Q5VTL7 733 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 OPN5Q6U736 354 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CCDC81Q6ZN84 652 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 RASSF6Q6ZTQ3 369 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CADM2Q8N3J6 435 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 OR52L1Q8NGH7 329 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ZNF563Q8TA94 476 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ELP5Q8TE02 316 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 TRUB1Q8WWH5 349 aaKnown RBP8.18□□□□□ -1.1
VPS50-207ENST00000458530 TMEM234Q8WY98 164 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ZNF566Q969W8 418 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 KIAA1143Q96AT1 154 aaPredicted RBP8.18□□□□□ -1.1
VPS50-207ENST00000458530 C8orf44Q96CB5 159 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 DTNBP1Q96EV8 351 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 Q96MT0 163 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 WFDC6Q9BQY6 131 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ADNPQ9H2P0 1102 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 NDUFA13Q9P0J0 144 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 MYOTQ9UBF9 498 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 ZNF223Q9UK11 482 aaPredicted RBP8.18□□□□□ -1.1
VPS50-207ENST00000458530 PCDHGA6Q9Y5G7 932 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 HS3ST3B1Q9Y662 390 aa8.18□□□□□ -1.1
VPS50-207ENST00000458530 CDC14CA4D256 554 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 ELOA3DA6NLF2 546 aaPredicted RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 SNTNA6NMZ2 147 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 FAM47E-STBD1D6RA91 191 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 E9PQ18 207 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 WWP2O00308 870 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 HCRTR2O43614 444 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CDC40O60508 579 aaKnown RBP eCLIP8.17□□□□□ -1.1
VPS50-207ENST00000458530 RAD1O60671 282 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms