RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 BTNL2Q9UIR0 455 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 SRPX2O60687 465 aaPredicted RBP18.4■□□□□ 0.54
SNX27-204ENST00000458013 SNRPBP14678 240 aaKnown RBP18.39■□□□□ 0.54
SNX27-204ENST00000458013 PROX2Q3B8N5 592 aa18.39■□□□□ 0.54
SNX27-204ENST00000458013 TMEM64Q6YI46 380 aa18.39■□□□□ 0.54
SNX27-204ENST00000458013 ADAMTS16Q8TE57 1224 aa18.39■□□□□ 0.54
SNX27-204ENST00000458013 VRTNQ9H8Y1 702 aa18.39■□□□□ 0.54
SNX27-204ENST00000458013 MYH11P35749 1972 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 C7P10643 843 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 RPS25P62851 125 aaKnown RBP18.39■□□□□ 0.53
SNX27-204ENST00000458013 GLO1Q04760 184 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 FAPQ12884 760 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 KEAP1Q14145 624 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 EMCNQ9ULC0 261 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 SURF4O15260 269 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 ATG12O94817 140 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 HLA-AP01891 365 aaKnown RBP18.39■□□□□ 0.53
SNX27-204ENST00000458013 FOSL1P15407 271 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 IVDP26440 423 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 TCTE1Q5JU00 501 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 RFLNAQ6ZTI6 216 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 TPPP3Q9BW30 176 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 ENKD1Q9H0I2 346 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 ZNF334Q9HCZ1 680 aaPredicted RBP18.39■□□□□ 0.53
SNX27-204ENST00000458013 ANKRD10Q9NXR5 420 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 V9GY05 133 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 MAN2B1O00754 1011 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 CHRNB1P11230 501 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 FCGR2AP12318 317 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 ZNF691Q5VV52 312 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 MEPCEQ7L2J0 689 aaKnown RBP18.39■□□□□ 0.53
SNX27-204ENST00000458013 OR5D14Q8NGL3 314 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 ZNF355PQ9NSJ1 428 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 GABRPO00591 440 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 C1SP09871 688 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 T-ENOLP0DO92 83 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 RGRP47804 291 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 TCEAL1Q15170 157 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 LCTLQ6UWM7 567 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 EID2Q8N6I1 236 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 DVL3Q92997 716 aaPredicted RBP18.39■□□□□ 0.53
SNX27-204ENST00000458013 CHRDQ9H2X0 955 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 SLAMF7Q9NQ25 335 aa18.39■□□□□ 0.53
SNX27-204ENST00000458013 UBE2NLQ5JXB2 153 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CPZQ66K79 652 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 KDELC1Q6UW63 502 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 SEC22AQ96IW7 307 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 RCE1Q9Y256 329 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 MYH10P35580 1976 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 RGPD8O14715 1765 aaPredicted RBP18.38■□□□□ 0.53
SNX27-204ENST00000458013 ACOD1A6NK06 481 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CLN5O75503 358 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 IDUAP35475 653 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CXADRP78310 365 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CAMK2DQ13557 499 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 C14orf28Q4W4Y0 310 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 C15orf39Q6ZRI6 1047 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 ESPNLQ6ZVH7 1005 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CDRT4Q8N9R6 151 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 MIB2Q96AX9 1013 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 TBC1D20Q96BZ9 403 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 SAMD10Q9BYL1 202 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 ULBP3Q9BZM4 244 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 HEBP1Q9NRV9 189 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 MON2Q7Z3U7 1717 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 MEIOCA2RUB1 952 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 HSD17B6O14756 317 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 C1orf105O95561 183 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 DRAXINQ8NBI3 349 aaPredicted RBP18.38■□□□□ 0.53
SNX27-204ENST00000458013 TAAR8Q969N4 342 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 PRR14Q9BWN1 585 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 PISDQ9UG56 409 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 HIDE1A8MVS5 230 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 SNAPC5O75971 98 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 ZNF322Q6U7Q0 402 aaPredicted RBP18.38■□□□□ 0.53
SNX27-204ENST00000458013 ALKAL2Q6UX46 152 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 DMBX1Q8NFW5 382 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 TCTEX1D2Q8WW35 142 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CASD1Q96PB1 797 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 OPA3Q9H6K4 179 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 PGAP2Q9UHJ9 254 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 NAV1Q8NEY1 1877 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CNMDO75829 334 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 GABRA5P31644 462 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 HOXA1P49639 335 aaPredicted RBP18.38■□□□□ 0.53
SNX27-204ENST00000458013 ARHGAP19Q14CB8 494 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 PM20D1Q6GTS8 502 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 ARFGAP1Q8N6T3 406 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 TMEM163Q8TC26 289 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 CHFRQ96EP1 664 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 C8orf33Q9H7E9 229 aaPredicted RBP18.38■□□□□ 0.53
SNX27-204ENST00000458013 ZDHHC7Q9NXF8 308 aa18.38■□□□□ 0.53
SNX27-204ENST00000458013 PUS1Q9Y606 427 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNX27-204ENST00000458013 MYH15Q9Y2K3 1946 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 A0A1W2PQ09 198 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 ANKRD34BA5PLL1 514 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 CLDN17P56750 224 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 CLEC1AQ8NC01 280 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 CTRCQ99895 268 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 TMEM269A0A1B0GVZ9 245 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms