RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ROPN1LQ96C74 230 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 CXorf56Q9H5V9 222 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 NGBQ9NPG2 151 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 PNPOQ9NVS9 261 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 KCNE5Q9UJ90 142 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 SLC35A3Q9Y2D2 325 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 C9JVG2 144 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 SULT2B1O00204 365 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 HS3ST1O14792 307 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 GCM2O75603 506 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 FESP07332 822 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 DHRS4L1P0CG22 281 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 CSNK2A1P68400 391 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 KRTAP1-1Q07627 177 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 BST1Q10588 318 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 STK11Q15831 433 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 SFRP5Q5T4F7 317 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 SAXO2Q658L1 398 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 TYW3Q6IPR3 259 aaKnown RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 HEPHL1Q6MZM0 1159 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 BHLHA15Q7RTS1 189 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF100Q8IYN0 542 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 GABRG1Q8N1C3 465 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 TRIML2Q8N7C3 387 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 MGARPQ8TDB4 240 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 SLC25A43Q8WUT9 341 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF775Q96BV0 537 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF524Q96C55 264 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 ZHX1-C8orf76Q96EF9 292 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 NEURL3Q96EH8 262 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 PSD2Q9BQI7 771 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 ESRP2Q9H6T0 727 aaKnown RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 MEAF6Q9HAF1 191 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 POLE3Q9NRF9 147 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 RNF115Q9Y4L5 304 aa13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 CHD3Q12873 2000 aaKnown RBP13.98□□□□□ -0.17
CHCHD3-204ENST00000457942 SMAD9O15198 467 aaKnown RBP13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 CD3EP07766 207 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 DIO1P49895 249 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 ANXA11P50995 505 aaKnown RBP13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 DMTNQ08495 405 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 ITGADQ13349 1161 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 CASP8Q14790 479 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 P2RY6Q15077 328 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 TAB1Q15750 504 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 MAPK14Q16539 360 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 SYT14P1Q58G82 188 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 FRRS1Q6ZNA5 592 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 GALNT5Q7Z7M9 940 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 RAB3IL1Q8TBN0 382 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 HSD17B8Q92506 261 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 PANX1Q96RD7 426 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF300Q96RE9 604 aaPredicted RBP13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 ZBTB18Q99592 522 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 POTEKPQ9BYX7 375 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 GSX2Q9BZM3 304 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 BCO1Q9HAY6 547 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 ACER3Q9NUN7 267 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 EMC3Q9P0I2 261 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 PRSS50Q9UI38 385 aa13.97□□□□□ -0.17
CHCHD3-204ENST00000457942 ETV2O00321 342 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 ANKRD28O15084 1053 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 CYTIPO60759 359 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 SCN2BO60939 215 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 LYZL6O75951 148 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 KITP10721 976 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 CCNA2P20248 432 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 PGM1P36871 562 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 OR3A2P47893 321 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 ATP5J2P56134 94 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 UFM1P61960 85 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 PHC1P78364 1004 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 FUT5Q11128 374 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 MPP2Q14168 576 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 TNFAIP8L3Q5GJ75 292 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 NXNQ6DKJ4 435 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 TMPPEQ6ZT21 453 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 Q6ZT83 130 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 RNF130Q86XS8 419 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 LRRC34Q8IZ02 419 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 UBE2J2Q8N2K1 259 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 ARFGAP2Q8N6H7 521 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF611Q8N823 705 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 CCDC115Q96NT0 180 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 CTPS2Q9NRF8 586 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 CHRNA9Q9UGM1 479 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 HAO1Q9UJM8 370 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 LAMP3Q9UQV4 416 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 USF3Q68DE3 2245 aa13.96□□□□□ -0.17
CHCHD3-204ENST00000457942 GOLGA8QA0A0J9YX86 632 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 GOLGA8OA6NCC3 632 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 CCDC154A6NI56 674 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 GOLGA8NF8WBI6 632 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 APOBEC1P41238 236 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms