RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NCMAPQ5T1S8 102 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 APOOLQ6UXV4 268 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 GKN2Q86XP6 184 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SYT12Q8IV01 421 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TOP6BLQ8N6T0 577 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PTDSS2Q9BVG9 487 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 HDHD2Q9H0R4 259 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 C20orf85Q9H1P6 137 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TSPAN10Q9H1Z9 355 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ASB8Q9H765 288 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ZC4H2Q9NQZ6 224 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MARK1Q9P0L2 795 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OARD1Q9Y530 152 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 BACE2Q9Y5Z0 518 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 STX7O15400 261 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PRODHO43272 600 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACP5P13686 325 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PTGER3P43115 390 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 AIF1P55008 147 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FABP9Q0Z7S8 132 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MEF2DQ14814 521 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 GPNMBQ14956 572 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ZCCHC12Q6PEW1 402 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ZNF613Q6PF04 617 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 DEF8Q6ZN54 512 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RAB44Q7Z6P3 723 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MISPQ8IVT2 679 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 POMGNT2Q8NAT1 580 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FAM46AQ96IP4 442 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 DPYSL5Q9BPU6 564 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TMEM45AQ9NWC5 275 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 WWOXQ9NZC7 414 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ASH2LQ9UBL3 628 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ZNF337Q9Y3M9 751 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACACAQ13085 2346 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TRAV8-7A0A075B6U6 113 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MED19A0JLT2 244 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 L7N2F9 121 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ARHGEF9O43307 516 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PEX14O75381 377 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 IFNA7P01567 189 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OR56A5P0C7T3 313 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 NPPBP16860 134 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 COL8A2P25067 703 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACKR3P25106 362 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 P2RY4P51582 365 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TAS2R50P59544 299 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RPS13P62277 151 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PPP3R1P63098 170 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 UBXN2BQ14CS0 331 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 GXYLT1Q4G148 440 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FAM109BQ6ICB4 259 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PWWP2BQ6NUJ5 590 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 IQCHQ86VS3 1027 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OR56B4Q8NH76 319 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TRMT10AQ8TBZ6 339 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ZPLD1Q8TCW7 415 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SMIM4Q8WVI0 70 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACOT12Q8WYK0 555 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OR2M2Q96R28 347 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SYT17Q9BSW7 474 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 LHX3Q9UBR4 397 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 USP9YO00507 2555 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TRIOBPQ9H2D6 2365 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 FBN2P35556 2912 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 MRPL3P09001 348 aaKnown RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 CTSHP09668 335 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 GSTM5P46439 218 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 OMPP47874 163 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 PITPNBP48739 271 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 FLI1Q01543 452 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 PTSQ03393 145 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 TWF1Q12792 350 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 SCARB2Q14108 478 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 TEAD2Q15562 447 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 ZNF239Q16600 458 aaKnown RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 EXOSC6Q5RKV6 272 aaKnown RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 DPPA4Q7L190 304 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 NLGN1Q8N2Q7 840 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 CCDC54Q8NEL0 328 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 DVL3Q92997 716 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 TOX2Q96NM4 488 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 IL17FQ96PD4 163 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 OR14A2Q96R54 314 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 FN3KRPQ9HA64 309 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 KCNE5Q9UJ90 142 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 RPS6KA6Q9UK32 745 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 ASB4Q9Y574 426 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 PQLC2LA1A4F0 135 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 A6NLC8 198 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 FAM25EA8MYX2 175 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 DCTN6O00399 190 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 LZTS3O60299 673 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 CLN5O75503 358 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 YIF1AO95070 293 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 GNRH1P01148 92 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 PRKAR1AP10644 381 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 PRPS2P11908 318 aa4.18□□□□□ -1.74
DEPDC1-202ENST00000456315 ZNF35P13682 527 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms