RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 TBC1D3KA0A087X1G2 549 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 A0A1W2PQU0 124 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 OR2M5A3KFT3 312 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TBC1D3FA6NER0 549 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 COLCA2A8K830 154 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TBC1D3LB9A6J9 549 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 FPGTO14772 594 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 SCN2BO60939 215 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 CRYABP02511 175 aaKnown RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TFP02787 698 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 HCKP08631 526 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TBC1D3HP0C7X1 549 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 CPEP16870 476 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 MAPK3P27361 379 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 CRABP1P29762 137 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 RAB2AP61019 212 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 MRPS21P82921 87 aaKnown RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 IRF8Q02556 426 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 FABP9Q0Z7S8 132 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 ILF3Q12906 894 aaKnown RBP eCLIP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 PDZK1IP1Q13113 114 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 CLN3Q13286 438 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 MINDY4Q4G0A6 757 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 USP39Q53GS9 565 aaKnown RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 XKR6Q5GH73 641 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 MANEAQ5SRI9 462 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 LIPJQ5W064 366 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TBC1D3GQ6DHY5 549 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 C22orf42Q6IC83 251 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TBC1D3CQ6IPX1 549 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 KIAA1161Q6NSJ0 714 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 ETV3LQ6ZN32 361 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 MOB3CQ70IA8 216 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 DCUN1D3Q8IWE4 304 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 KLHDC8AQ8IYD2 350 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TBC1D3Q8IZP1 549 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 OR56A3Q8NH54 315 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 OR52P1PQ8NH57 321 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 ZDHHC16Q969W1 377 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 FAM131CQ96AQ9 280 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 SENP5Q96HI0 755 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 NELL2Q99435 816 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 CPPED1Q9BRF8 314 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 SLC17A9Q9BYT1 436 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 OR52A5Q9H2C5 316 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 REEP4Q9H6H4 257 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 SLC25A19Q9HC21 320 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 PHPT1Q9NRX4 125 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-218ENST00000456174 RASL12Q9NYN1 266 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 TAS2R3Q9NYW6 316 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 SLC23A2Q9UGH3 650 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 ACSL6Q9UKU0 697 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 DLGAP4Q9Y2H0 992 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
HDAC9-218ENST00000456174 OR6C74A6NCV1 312 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 A8MVJ9 347 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 E7EQ34 232 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 ZNF593O00488 134 aaPredicted RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 LANCL1O43813 399 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 UGDHO60701 494 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 PRAF2O60831 178 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 FZD7O75084 574 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 CRTAPO75718 401 aaPredicted RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 NUDT7P0C024 238 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 OR8U8P0C7N1 319 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 RNH1P13489 461 aaKnown RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 PAX1P15863 534 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 AGAP20933 346 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 TEAD1P28347 426 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 ADPRHP54922 357 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 CTBP2P56545 445 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 SEC61A1P61619 476 aaKnown RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 VLDLRP98155 873 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 IER5LQ5T953 404 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 FRG2Q64ET8 278 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 SLC30A6Q6NXT4 461 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 QSOX2Q6ZRP7 698 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 FAM71CQ8NEG0 241 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 PROKR2Q8NFJ6 384 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 OR9A1PQ8NGU1 263 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 GPBAR1Q8TDU6 330 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 CA5BP1Q8WTZ4 195 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 ZNF480Q8WV37 535 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 TM9SF4Q92544 642 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 FAM120BQ96EK7 910 aaKnown RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 RHOVQ96L33 236 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 LRR1Q96L50 414 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 FRG2BQ96QU4 278 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 OR4K3Q96R72 315 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 ZNF559Q9BR84 538 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 C7orf50Q9BRJ6 194 aaKnown RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 THAP7Q9BT49 309 aaPredicted RBP7.09□□□□□ -1.28
HDAC9-218ENST00000456174 ACPTQ9BZG2 426 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 ZDHHC5Q9C0B5 715 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 DUSP22Q9NRW4 184 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 TM7SF3Q9NS93 570 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 POFUT2Q9Y2G5 429 aa7.09□□□□□ -1.28
HDAC9-218ENST00000456174 TMEM200CA6NKL6 621 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms