RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TBX19O60806 448 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 MRPL33O75394 65 aaKnown RBP20.3■□□□□ 0.84
PTPRA-208ENST00000455631 CYP7B1O75881 506 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 GSTA1P08263 222 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 FAM174BQ3ZCQ3 159 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 SYT14P1Q58G82 188 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 RELL1Q8IUW5 271 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 ZHX1-C8orf76Q96EF9 292 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 OCEL1Q9H607 264 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 SIRT3Q9NTG7 399 aaPredicted RBP20.3■□□□□ 0.84
PTPRA-208ENST00000455631 ESPNB1AK53 854 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 GPR171O14626 319 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 EIF4E2O60573 245 aaKnown RBP20.29■□□□□ 0.84
PTPRA-208ENST00000455631 TFPIP10646 304 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 SDC1P18827 310 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 NTF4P34130 210 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 MERTKQ12866 999 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 PDE7AQ13946 482 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 CASP12Q6UXS9 341 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 RINLQ6ZS11 566 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 C17orf78Q8N4C9 275 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 ADAMTS15Q8TE58 950 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 ZMYND19Q96E35 227 aaPredicted RBP20.29■□□□□ 0.84
PTPRA-208ENST00000455631 DNAJA3Q96EY1 480 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 METTL2AQ96IZ6 378 aaKnown RBP20.29■□□□□ 0.84
PTPRA-208ENST00000455631 THUMPD3Q9BV44 507 aaKnown RBP20.29■□□□□ 0.84
PTPRA-208ENST00000455631 SLC17A5Q9NRA2 495 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 C1orf109Q9NX04 203 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 CCL27Q9Y4X3 112 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 PTGDR2Q9Y5Y4 395 aa20.29■□□□□ 0.84
PTPRA-208ENST00000455631 NPIPB9F8W1W9 429 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 SESN3P58005 492 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 ACTG1P63261 375 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 C8orf74Q6P047 294 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 SPATA19Q7Z5L4 167 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 LCA5Q86VQ0 697 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 C1orf162Q8NEQ5 155 aaPredicted RBP20.28■□□□□ 0.84
PTPRA-208ENST00000455631 PIGXQ8TBF5 258 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 SLC25A43Q8WUT9 341 aaPredicted RBP20.28■□□□□ 0.84
PTPRA-208ENST00000455631 ST8SIA1Q92185 356 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 ACTRT3Q9BYD9 372 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 UPB1Q9UBR1 384 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 FAF1Q9UNN5 650 aaPredicted RBP20.28■□□□□ 0.84
PTPRA-208ENST00000455631 KCNE3Q9Y6H6 103 aa20.28■□□□□ 0.84
PTPRA-208ENST00000455631 PDLIM1O00151 329 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 VENTXO95231 258 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 SLU7O95391 586 aaKnown RBP20.27■□□□□ 0.84
PTPRA-208ENST00000455631 EGR1P18146 543 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 PRPH2P23942 346 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 APEX1P27695 318 aaKnown RBP20.27■□□□□ 0.84
PTPRA-208ENST00000455631 IL2RGP31785 369 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 SERPINF1P36955 418 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 CHN2P52757 468 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 SKP2Q13309 424 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 TP53BP2Q13625 1128 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 PDZK1Q5T2W1 519 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 KLHL24Q6TFL4 600 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 LINC01356Q8N9X3 169 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 TMEM234Q8WY98 164 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 TNFRSF12AQ9NP84 129 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 BAIAP2L1Q9UHR4 511 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 METRNQ9UJH8 293 aa20.27■□□□□ 0.84
PTPRA-208ENST00000455631 H3BQF6 201 aa20.26■□□□□ 0.83
PTPRA-208ENST00000455631 PRPS1P60891 318 aa20.26■□□□□ 0.83
PTPRA-208ENST00000455631 RPL38P63173 70 aaKnown RBP20.26■□□□□ 0.83
PTPRA-208ENST00000455631 TIFABQ6ZNK6 161 aa20.26■□□□□ 0.83
PTPRA-208ENST00000455631 C3orf56Q8N813 242 aa20.26■□□□□ 0.83
PTPRA-208ENST00000455631 SGMS2Q8NHU3 365 aa20.26■□□□□ 0.83
PTPRA-208ENST00000455631 DCTN4Q9UJW0 460 aa20.26■□□□□ 0.83
PTPRA-208ENST00000455631 A0A087WUV0 522 aaPredicted RBP20.25■□□□□ 0.83
PTPRA-208ENST00000455631 EXOC1LA0A1B0GW35 172 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SERINC4A6NH21 518 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SLC28A1O00337 649 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 STAMBPO95630 424 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 WNT11O96014 354 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 KRT16P08779 473 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SLC16A1P53985 500 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 TGFBR3Q03167 851 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 CLEC6AQ6EIG7 209 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 FRMD7Q6ZUT3 714 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 CCDC103Q8IW40 242 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SEMA6DQ8NFY4 1073 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 ZFAND2BQ8WV99 257 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 HPS1Q92902 700 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 FCRL1Q96LA6 429 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SNX18Q96RF0 628 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 KCNS3Q9BQ31 491 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 LAT2Q9GZY6 243 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SLC7A10Q9NS82 523 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 CA10Q9NS85 328 aa20.25■□□□□ 0.83
PTPRA-208ENST00000455631 SPIN1Q9Y657 262 aaPredicted RBP20.25■□□□□ 0.83
PTPRA-208ENST00000455631 TENM1Q9UKZ4 2725 aa20.24■□□□□ 0.83
PTPRA-208ENST00000455631 SNUPNO95149 360 aaKnown RBP20.24■□□□□ 0.83
PTPRA-208ENST00000455631 PMS2P2O95744 297 aa20.24■□□□□ 0.83
PTPRA-208ENST00000455631 UROSP10746 265 aa20.24■□□□□ 0.83
PTPRA-208ENST00000455631 MAGEA8P43361 318 aa20.24■□□□□ 0.83
PTPRA-208ENST00000455631 CCT3P49368 545 aaKnown RBP20.24■□□□□ 0.83
PTPRA-208ENST00000455631 ZSWIM7Q19AV6 140 aa20.24■□□□□ 0.83
PTPRA-208ENST00000455631 SPDYE7PQ495Y7 208 aa20.24■□□□□ 0.83
PTPRA-208ENST00000455631 VHLLQ6RSH7 139 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms