RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CRATP43155 626 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 PLAURQ03405 335 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 SYT14P1Q58G82 188 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 C6orf10Q5SRN2 563 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 STAC2Q6ZMT1 411 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 GRINAQ7Z429 371 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 PEX5LQ8IYB4 626 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 VPS33AQ96AX1 596 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 MBD6Q96DN6 1003 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 PIK3IP1Q96FE7 263 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 CCDC106Q9BWC9 280 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 TPT1P8Q9HAU6 139 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 CTPS2Q9NRF8 586 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 CALML5Q9NZT1 146 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 KLHL9Q9P2J3 617 aa18.91■□□□□ 0.62
HMGB3-205ENST00000455596 A0A1W2PPR1 153 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 DEFB108AA8MXU0 73 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 HMGB1P1B2RPK0 211 aaPredicted RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 SIAH2O43255 324 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 ATE1O95260 518 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 DBIP07108 87 aaKnown RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 YES1P07947 543 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 ETFAP13804 333 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 MRPL19P49406 292 aaKnown RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 DIO1P49895 249 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 IDH3AP50213 366 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 MVDP53602 400 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 DSTNP60981 165 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 CSNK2A1P68400 391 aaPredicted RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 NUFIP2Q7Z417 695 aaKnown RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 CNOT9Q92600 299 aaKnown RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 ALPK1Q96QP1 1244 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 CCDC28BQ9BUN5 200 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 INTS9Q9NV88 658 aaKnown RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 CHRNA9Q9UGM1 479 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 GPR52Q9Y2T5 361 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 F8P00451 2351 aa18.9■□□□□ 0.62
HMGB3-205ENST00000455596 RAI1Q7Z5J4 1906 aaPredicted RBP18.9■□□□□ 0.62
HMGB3-205ENST00000455596 PRRC2AP48634 2157 aaKnown RBP18.89■□□□□ 0.62
HMGB3-205ENST00000455596 SULT2B1O00204 365 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 CYTIPO60759 359 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 ADAM11O75078 769 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 TFPIP10646 304 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 FKBP2P26885 142 aaKnown RBP18.89■□□□□ 0.61
HMGB3-205ENST00000455596 IDH2P48735 452 aaKnown RBP18.89■□□□□ 0.61
HMGB3-205ENST00000455596 GTDC1Q4AE62 458 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 MRPL2Q5T653 305 aaKnown RBP18.89■□□□□ 0.61
HMGB3-205ENST00000455596 TFAP2EQ6VUC0 442 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 TMPPEQ6ZT21 453 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 C22orf34Q6ZV56 151 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 PSD2Q9BQI7 771 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 EBF4Q9BQW3 602 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 OR10A4Q9H209 315 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 VIPAS39Q9H9C1 493 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 BCO1Q9HAY6 547 aa18.89■□□□□ 0.61
HMGB3-205ENST00000455596 THUMPD1Q9NXG2 353 aaKnown RBP18.89■□□□□ 0.61
HMGB3-205ENST00000455596 TMEM247A6NEH6 219 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 AP3D1O14617 1153 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 SMAD9O15198 467 aaKnown RBP18.88■□□□□ 0.61
HMGB3-205ENST00000455596 BCHEP06276 602 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 PSMB1P20618 241 aaKnown RBP18.88■□□□□ 0.61
HMGB3-205ENST00000455596 HTR3AP46098 478 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 CRISP3P54108 245 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 PPP2R2AP63151 447 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 RASGEF1BQ0VAM2 473 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 MAPK11Q15759 364 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 DEFB113Q30KQ7 82 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 SLC2A7Q6PXP3 512 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 GTF2H4Q92759 462 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 AURKBQ96GD4 344 aaPredicted RBP18.88■□□□□ 0.61
HMGB3-205ENST00000455596 ACTR6Q9GZN1 396 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 PCDHB14Q9Y5E9 798 aa18.88■□□□□ 0.61
HMGB3-205ENST00000455596 FAAHO00519 579 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 PMS2P2O95744 297 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 FESP07332 822 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 TFPTP0C1Z6 253 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 UQCRBP14927 111 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 CLK1P49759 484 aaKnown RBP18.87■□□□□ 0.61
HMGB3-205ENST00000455596 AQP5P55064 265 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 LIN52Q52LA3 116 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 CXorf67Q86X51 503 aaPredicted RBP18.87■□□□□ 0.61
HMGB3-205ENST00000455596 ADGRG3Q86Y34 549 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 ZNF440Q8IYI8 595 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 OR52P1PQ8NH57 321 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 SLC38A5Q8WUX1 472 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 ZHX1-C8orf76Q96EF9 292 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 HDHD5Q9BXW7 423 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 PAIP1Q9H074 479 aaKnown RBP18.87■□□□□ 0.61
HMGB3-205ENST00000455596 RAD21L1Q9H4I0 556 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 DSPPQ9NZW4 1301 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 ING1Q9UK53 422 aaPredicted RBP18.87■□□□□ 0.61
HMGB3-205ENST00000455596 HDGFL3Q9Y3E1 203 aa18.87■□□□□ 0.61
HMGB3-205ENST00000455596 CFAP73A6NFT4 308 aa18.86■□□□□ 0.61
HMGB3-205ENST00000455596 CLIC1O00299 241 aa18.86■□□□□ 0.61
HMGB3-205ENST00000455596 GCM2O75603 506 aaPredicted RBP18.86■□□□□ 0.61
HMGB3-205ENST00000455596 THBDP07204 575 aa18.86■□□□□ 0.61
HMGB3-205ENST00000455596 H2AFXP16104 143 aaPredicted RBP18.86■□□□□ 0.61
HMGB3-205ENST00000455596 KLK2P20151 261 aa18.86■□□□□ 0.61
HMGB3-205ENST00000455596 POLR2HP52434 150 aaKnown RBP18.86■□□□□ 0.61
HMGB3-205ENST00000455596 EPS8Q12929 822 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms