RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 KLC1Q07866 573 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TGM3Q08188 693 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SLAMF1Q13291 335 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ITGADQ13349 1161 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PDE7AQ13946 482 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SF3A2Q15428 464 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 HKDC1Q2TB90 917 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRTGQ2VWP7 1150 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ANXA2RQ3ZCQ2 193 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 DNAL1Q4LDG9 190 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 WASHC2DQ5SRD0 308 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ATAD3BQ5T9A4 648 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 CPTPQ5TA50 214 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 B3GNTL1Q67FW5 361 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ANKRD26P1Q6NSI1 321 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ARHGAP11AQ6P4F7 1023 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TMEM71Q6P5X7 295 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TRIM40Q6P9F5 258 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 DHRS13Q6UX07 377 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 DLEU7Q6UYE1 221 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZNF793Q6ZN11 406 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 NUDT13Q86X67 352 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SIAH3Q8IW03 269 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PGAM4Q8N0Y7 254 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZCCHC7Q8N3Z6 543 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 CSNK1A1LQ8N752 337 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SLC24A4Q8NFF2 622 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR8J2Q8NGG1 315 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR56B2PQ8NGI1 322 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 CDC26Q8NHZ8 85 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ADAMTS17Q8TE56 1095 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 FAR1Q8WVX9 515 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 STARD8Q92502 1023 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 GTF2H4Q92759 462 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 NAT6Q93015 286 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ROPN1LQ96C74 230 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 LRRC58Q96CX6 371 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 MTERF3Q96E29 417 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR52E6Q96RD3 313 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 DDOQ99489 341 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 HOPXQ9BPY8 73 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TPPP3Q9BW30 176 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 LRRN3Q9H3W5 708 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 FN3KQ9H479 309 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 REEP4Q9H6H4 257 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SRD5A3Q9H8P0 318 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 WDR41Q9HAD4 459 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 IL1RL2Q9HB29 575 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PALMDQ9NP74 551 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 EQTNQ9NQ60 294 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 KLHL1Q9NR64 748 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 STARD5Q9NSY2 213 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 NDE1Q9NXR1 346 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR6C3Q9NZP0 311 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TMEM9Q9P0T7 183 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PLCL2Q9UPR0 1127 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ERVK-11Q9UQG0 969 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ASB4Q9Y574 426 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SLC22A7Q9Y694 548 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 FER1L5A0AVI2 2057 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 MN1Q10571 1320 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SPTBN2O15020 2390 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SPEGQ15772 3267 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 A0A096LPI6 279 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TRBV5-3A0A0A0MS03 114 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 WASHC1A8K0Z3 465 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 HSPB2A8KAH6 182 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 A8MU76 341 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 FXYD1O00168 92 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CLDN4O14493 209 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CDX4O14627 284 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TOX3O15405 576 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CYTIPO60759 359 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 DNAJB6O75190 326 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR6B1O95007 311 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NXPH3O95157 252 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CPNE6O95741 557 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 LDOC1O95751 146 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 RPLP0P05388 317 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CD63P08962 238 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ETFAP13804 333 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CD59P13987 128 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 JUNBP17275 347 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CKMT2P17540 419 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NELFEP18615 380 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CERS1P27544 350 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PTPN6P29350 595 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 RPL3P39023 403 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 MAGEA8P43361 318 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 DUSP3P51452 185 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 HNRNPFP52597 415 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 MTTPP55157 894 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ADORA2A-AS1P86434 159 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PSG6Q00889 435 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms