RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 KLF4O43474 513 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 H6PDO95479 791 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 TFPIP10646 304 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 IDO1P14902 403 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
CHD3-206ENST00000452447 DIO1P49895 249 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 CSNK2A1P68400 391 aaPredicted RBP11.46□□□□□ -0.57
CHD3-206ENST00000452447 KCNJ10P78508 379 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.57
CHD3-206ENST00000452447 CHRNEQ04844 493 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 SYT14P1Q58G82 188 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 TMPPEQ6ZT21 453 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 PLEKHM3Q6ZWE6 761 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 GABRG1Q8N1C3 465 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 S100PBPQ96BU1 408 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 ZG16BQ96DA0 208 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 PLPPR2Q96GM1 343 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 PSD2Q9BQI7 771 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 INPP5KQ9BT40 448 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 BCO1Q9HAY6 547 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 DLL4Q9NR61 685 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 GPR45Q9Y5Y3 372 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 CSPG4Q6UVK1 2322 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 CYTIPO60759 359 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 GCM2O75603 506 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 KRT75O95678 551 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 IL6P05231 212 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 LOXP28300 417 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 IL12AP29459 219 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 FUT5Q11128 374 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 ITGADQ13349 1161 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 P2RY6Q15077 328 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 Q5PR19 223 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 SFRP5Q5T4F7 317 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 AP1ARQ63HQ0 302 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 ZNF704Q6ZNC4 412 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 GRINAQ7Z429 371 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 HMGN2P46Q86SG4 172 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 LRRC75A-AS1Q8N1F1 130 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 ARFGAP2Q8N6H7 521 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 FAM71CQ8NEG0 241 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 KISS1RQ969F8 398 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 TRNT1Q96Q11 434 aaKnown RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 NGBQ9NPG2 151 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 EXOSC3Q9NQT5 275 aaKnown RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 CHRNA9Q9UGM1 479 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 PLCE1Q9P212 2302 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 HEATR1Q9H583 2144 aaKnown RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 CLDN24A6NM45 220 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 RFXANKO14593 260 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 SMAD9O15198 467 aaKnown RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 SLC22A3O75751 556 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 ADAP00813 363 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 GSNP06396 782 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 FESP07332 822 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 NR2F1P10589 423 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 H2AFXP16104 143 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 IL7RP16871 459 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 FKBP2P26885 142 aaKnown RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 ADSLP30566 484 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 CDKN2CP42773 168 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 GNA13Q14344 377 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 TSC22D1Q15714 1073 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 LRRC74BQ6ZQY2 392 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 HDXQ7Z353 690 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 ANKFN1Q8N957 763 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 HSD17B8Q92506 261 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 ZHX1-C8orf76Q96EF9 292 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 USB1Q9BQ65 265 aaKnown RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 CCDC106Q9BWC9 280 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 GSX1Q9H4S2 264 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 MTHFD2LQ9H903 347 aaPredicted RBP11.45□□□□□ -0.58
CHD3-206ENST00000452447 CTPS2Q9NRF8 586 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
CHD3-206ENST00000452447 PRAMEF27A3QJZ7 478 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 ZNF724A8MTY0 619 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 ZNF814B7Z6K7 855 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 BCAS1O75363 584 aaPredicted RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 ANP32DO95626 131 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 C1QCP02747 245 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 UQCRBP14927 111 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 HTR3AP46098 478 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 OR3A2P47893 321 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 IDH2P48735 452 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 CAPRIN1Q14444 709 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 SYPL1Q16563 259 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 PDCD4Q53EL6 469 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 Q6ZT83 130 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 GALNT5Q7Z7M9 940 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 BIVMQ86UB2 503 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 MTDHQ86UE4 582 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 KRTAP1-3Q8IUG1 177 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 CMIPQ8IY22 773 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 ZNF100Q8IYN0 542 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 PIWIL2Q8TC59 973 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 PNPT1Q8TCS8 783 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 PERPQ96FX8 193 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 MAELQ96JY0 434 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms