RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CR2P20023 1033 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ITGB8P26012 769 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 LTKP29376 864 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 DAPP51397 102 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 PRRX1P54821 245 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 HMGCS2P54868 508 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 UBE2G2P60604 165 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 PAFAH1B2P68402 229 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 DHODHQ02127 395 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZP2Q05996 745 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 DSC1Q08554 894 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TAZQ16635 292 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OR2G6Q5TZ20 316 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZNF626Q68DY1 528 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 FAHD1Q6P587 224 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 PIGZQ86VD9 579 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 BAP18Q8IXM2 172 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 DND1Q8IYX4 353 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 DEFB106AQ8N104 65 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 RNF149Q8NC42 400 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 CHST4Q8NCG5 386 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 NUDT10Q8NFP7 164 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OR4B1Q8NGF8 309 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 GPR150Q8NGU9 434 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OR8U1Q8NH10 309 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OR52J3Q8NH60 311 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 NFKBIDQ8NI38 313 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SYNPRQ8TBG9 265 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 IFI44Q8TCB0 444 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SFXN5Q8TD22 340 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 GPR152Q8TDT2 470 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 RPL10LQ96L21 214 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 HSD17B14Q9BPX1 270 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ATG101Q9BSB4 218 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ELOVL4Q9GZR5 314 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 MUC3BQ9H195 1237 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SLC32A1Q9H598 525 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TUBA4BQ9H853 241 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SGK2Q9HBY8 427 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 MKKSQ9NPJ1 570 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 NRIP3Q9NQ35 241 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 DDX4Q9NQI0 724 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 SLC17A5Q9NRA2 495 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SLC35D1Q9NTN3 355 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 COA4Q9NYJ1 87 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 KCNIP1Q9NZI2 227 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 MYOTQ9UBF9 498 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 AJAP1Q9UKB5 411 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 UBR2Q8IWV8 1755 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SPATA31A5Q5VU36 1347 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SPATA31A7Q8IWB4 1347 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TRAV1-2A0A0B4J238 106 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TEX13DA0A0J9YY54 714 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 A0A1B0GTW7 788 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SLC22A20A6NK97 555 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 CDRT15L2A8MXV6 281 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 B4E171 279 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 LGALS8O00214 317 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 CYB5BO43169 146 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SIAH2O43255 324 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SUSD5O60279 629 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OR10H2O60403 315 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 STBD1O95210 358 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SCGB1D2O95969 90 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 PTHP01270 115 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 SCGB1A1P11684 91 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 GABRA1P14867 456 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 FABP4P15090 132 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZNF20P17024 532 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 CELP19835 753 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 RPL10P27635 214 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 CD82P27701 267 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TEAD1P28347 426 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 PTGFRP43088 359 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OR3A1P47881 315 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 CEBPDP49716 269 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 RAB28P51157 221 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 AKR1C2P52895 323 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 OAZ1P54368 228 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 MANFP55145 182 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 WNT3AP56704 352 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 STARD6P59095 220 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ERVFRD-1P60508 538 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 RPP30P78346 268 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 ILKQ13418 452 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 PCBP2Q15366 365 aaKnown RBP eCLIP2.07□□□□□ -2.08
USP53-202ENST00000450251 OR8G1Q15617 311 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 CTU2Q2VPK5 515 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 CATSPEREQ5SY80 951 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TMEM244Q5VVB8 128 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 FAHD2BQ6P2I3 314 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 MAVSQ7Z434 540 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 MDGA2Q7Z553 956 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 IGDCC3Q8IVU1 814 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZNF679Q8IYX0 411 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZNF619Q8N2I2 560 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 TOP6BLQ8N6T0 577 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZNF676Q8N7Q3 588 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms