RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TTKP33981 857 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 P2RX1P51575 399 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 NUDT6P53370 316 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 CRYZQ08257 329 aaKnown RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 CBFBQ13951 182 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ELOA3BQ3SY89 546 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 MEDAGQ5VYS4 303 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 AHSA2Q719I0 299 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 PPP1R32Q7Z5V6 425 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 GPR141Q7Z602 305 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ELOA3Q8NG57 546 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 GGHQ92820 318 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 MYDGFQ969H8 173 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 SAMD8Q96LT4 415 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 TMEM43Q9BTV4 400 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 OR52D1Q9H346 318 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 AMBNQ9NP70 447 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 SIGLEC7Q9Y286 467 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 GNB5O14775 395 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 HCN1O60741 890 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 PTP4A3O75365 173 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 FUT1P19526 365 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 PCMT1P22061 227 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 FXYD6P3P58550 94 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 RPS18P62269 152 aaKnown RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 C17orf67Q0P5P2 114 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 SLC30A6Q6NXT4 461 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 SMARCD3Q6STE5 483 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 LSRQ86X29 649 aaPredicted RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 CACTIN-AS1Q8N1I8 211 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 OR52L1Q8NGH7 329 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 OR13C2Q8NGS9 318 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 OR4Q3Q8NH05 313 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 B4GALNT2Q8NHY0 566 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 DUSP19Q8WTR2 217 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 FGF11Q92914 225 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ZNF524Q96C55 264 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 KLHDC3Q9BQ90 382 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 GPR87Q9BY21 358 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 UBQLN3Q9H347 655 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 CNOT2Q9NZN8 540 aaKnown RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 EXPH5Q8NEV8 1989 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 EFCAB10A6NFE3 127 aa13□□□□□ -0.33
USP39-207ENST00000450066 C17orf51A8MQB3 221 aa13□□□□□ -0.33
USP39-207ENST00000450066 C21orf140B9A014 251 aa13□□□□□ -0.33
USP39-207ENST00000450066 TNFSF15O95150 251 aa13□□□□□ -0.33
USP39-207ENST00000450066 CELA2AP08217 269 aa13□□□□□ -0.33
USP39-207ENST00000450066 BMP7P18075 431 aa13□□□□□ -0.33
USP39-207ENST00000450066 RAB39AQ14964 217 aa13□□□□□ -0.33
USP39-207ENST00000450066 NTRK2Q16620 822 aa13□□□□□ -0.33
USP39-207ENST00000450066 PGGHGQ32M88 737 aa13□□□□□ -0.33
USP39-207ENST00000450066 OAFQ86UD1 273 aa13□□□□□ -0.33
USP39-207ENST00000450066 NLGN4YQ8NFZ3 816 aaPredicted RBP13□□□□□ -0.33
USP39-207ENST00000450066 TMEM163Q8TC26 289 aa13□□□□□ -0.33
USP39-207ENST00000450066 SPACA9Q96E40 222 aaPredicted RBP13□□□□□ -0.33
USP39-207ENST00000450066 SGTBQ96EQ0 304 aa13□□□□□ -0.33
USP39-207ENST00000450066 ZNF160Q9HCG1 818 aa13□□□□□ -0.33
USP39-207ENST00000450066 HHATLQ9HCP6 504 aa13□□□□□ -0.33
USP39-207ENST00000450066 MED17Q9NVC6 651 aa13□□□□□ -0.33
USP39-207ENST00000450066 GPR83Q9NYM4 423 aa13□□□□□ -0.33
USP39-207ENST00000450066 IL20RAQ9UHF4 553 aa13□□□□□ -0.33
USP39-207ENST00000450066 CEPT1Q9Y6K0 416 aa13□□□□□ -0.33
USP39-207ENST00000450066 KNTC1P50748 2209 aa13□□□□□ -0.33
USP39-207ENST00000450066 SDK2Q58EX2 2172 aa13□□□□□ -0.33
USP39-207ENST00000450066 DMXL1Q9Y485 3027 aa13□□□□□ -0.33
USP39-207ENST00000450066 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
USP39-207ENST00000450066 IGKV1D-42A0A075B6H8 117 aa13□□□□□ -0.33
USP39-207ENST00000450066 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13□□□□□ -0.33
USP39-207ENST00000450066 H3BSA7 217 aa13□□□□□ -0.33
USP39-207ENST00000450066 SURF4O15260 269 aa13□□□□□ -0.33
USP39-207ENST00000450066 CDC40O60508 579 aaKnown RBP eCLIP13□□□□□ -0.33
USP39-207ENST00000450066 ITGA10O75578 1167 aa13□□□□□ -0.33
USP39-207ENST00000450066 NUDT14O95848 222 aa13□□□□□ -0.33
USP39-207ENST00000450066 MT-ND2P03891 347 aa13□□□□□ -0.33
USP39-207ENST00000450066 HMGN1P05114 100 aa13□□□□□ -0.33
USP39-207ENST00000450066 CDK1P06493 297 aa13□□□□□ -0.33
USP39-207ENST00000450066 ICAM2P13598 275 aa13□□□□□ -0.33
USP39-207ENST00000450066 TACR3P29371 465 aa13□□□□□ -0.33
USP39-207ENST00000450066 OTX2P32243 289 aa13□□□□□ -0.33
USP39-207ENST00000450066 SLC15A1P46059 708 aa13□□□□□ -0.33
USP39-207ENST00000450066 GAS1P54826 345 aa13□□□□□ -0.33
USP39-207ENST00000450066 MVKQ03426 396 aa13□□□□□ -0.33
USP39-207ENST00000450066 SYT14P1Q58G82 188 aa13□□□□□ -0.33
USP39-207ENST00000450066 GTF2IRD2BQ6EKJ0 949 aa13□□□□□ -0.33
USP39-207ENST00000450066 GTF2IRD2Q86UP8 949 aa13□□□□□ -0.33
USP39-207ENST00000450066 SLC43A2Q8N370 569 aa13□□□□□ -0.33
USP39-207ENST00000450066 SVOPQ8N4V2 548 aa13□□□□□ -0.33
USP39-207ENST00000450066 GPR119Q8TDV5 335 aa13□□□□□ -0.33
USP39-207ENST00000450066 LRR1Q96L50 414 aa13□□□□□ -0.33
USP39-207ENST00000450066 DNAJC27Q9NZQ0 273 aa13□□□□□ -0.33
USP39-207ENST00000450066 SPAARA0A1B0GVQ0 90 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 PIPP12273 146 aaPredicted RBP12.99□□□□□ -0.33
USP39-207ENST00000450066 SLC9A3P48764 834 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 DNASE1L3Q13609 305 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms