RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TXLNBQ8N3L3 684 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 RNF175Q8N4F7 328 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 OR4N2Q8NGD1 307 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 CKAP2Q8WWK9 683 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 SLC9A6Q92581 669 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 SGCDQ92629 289 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF75CPQ92670 426 aaPredicted RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 Q96M66 194 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 BBS4Q96RK4 519 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 NPAS1Q99742 590 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 GATA5Q9BWX5 397 aaPredicted RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 TPK1Q9H3S4 243 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 MOV10Q9HCE1 1003 aaKnown RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 XAB2Q9HCS7 855 aaKnown RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF275Q9NSD4 429 aaPredicted RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 FLRT3Q9NZU0 649 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 ASH2LQ9UBL3 628 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 UTS2RQ9UKP6 389 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 CES1P1Q9UKY3 287 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 VWA7Q9Y334 891 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 LYSTQ99698 3801 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 IGKV3D-15A0A087WSY6 115 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 IGHV3-15A0A0B4J1V0 119 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 IGHV1-18A0A0C4DH31 117 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 SH3PXD2BA1X283 911 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 CXorf49A8MYA2 514 aaPredicted RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 KLF11O14901 512 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 PIP5K1CO60331 668 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 CCNT2O60583 730 aaKnown RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 COQ9O75208 318 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 AHSGP02765 367 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 GBAP04062 536 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 IGFBP1P08833 259 aaPredicted RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 ADRA2AP08913 450 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 SLC7A1P30825 629 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 MAGEA6P43360 314 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 TPM4P67936 248 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 PSG6Q00889 435 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 NAAAQ02083 359 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF155Q12901 538 aaPredicted RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 PDK3Q15120 406 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 C3orf36Q3SXR2 165 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 FAM205BPQ63HN1 556 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 C9orf139Q6ZV77 190 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 PAGE2Q7Z2X7 111 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 CDK20Q8IZL9 346 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 POC1BQ8TC44 478 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 KLHL29Q96CT2 875 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 ARL5BQ96KC2 179 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 RHOVQ96L33 236 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 GBP4Q96PP9 640 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 MS4A7Q9GZW8 240 aaPredicted RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 Q9N2J8 555 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 C19orf73Q9NVV2 129 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 GPATCH2Q9NW75 528 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 C1RLQ9NZP8 487 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 NOSIPQ9Y314 301 aaKnown RBP6.74□□□□□ -1.33
LINC01961-201ENST00000449954 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF780BQ9Y6R6 833 aa6.74□□□□□ -1.33
LINC01961-201ENST00000449954 TCRBV7S3A2A0A539 114 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 ALG1L2C9J202 215 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 C9JVG2 144 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 M0R233 179 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 PDLIM1O00151 329 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 GPR171O14626 319 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 SYNGR3O43761 229 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 UTS2O95399 124 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 PPP1R3DO95685 299 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 IGHV2-5P01817 119 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 GSNP06396 782 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 TPM1P09493 284 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 EVX1P49640 407 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 PGGT1BP53609 377 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 PROK1P58294 105 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 FOXF1Q12946 379 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 SNX1Q13596 522 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 TMEM176BQ3YBM2 270 aaPredicted RBP6.73□□□□□ -1.33
LINC01961-201ENST00000449954 MMEL1Q495T6 779 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 FBXO48Q5FWF7 155 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 ABLIM2Q6H8Q1 611 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 MISPQ8IVT2 679 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 SAMD14Q8IZD0 417 aaPredicted RBP6.73□□□□□ -1.33
LINC01961-201ENST00000449954 BCL6BQ8N143 479 aaPredicted RBP6.73□□□□□ -1.33
LINC01961-201ENST00000449954 PDPRQ8NCN5 879 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 FBXO27Q8NI29 283 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 C1orf54Q8WWF1 131 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 BOD1Q96IK1 185 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 ADAM29Q9UKF5 820 aa6.73□□□□□ -1.33
LINC01961-201ENST00000449954 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
LINC01961-201ENST00000449954 TMEM129A0AVI4 362 aa6.72□□□□□ -1.33
LINC01961-201ENST00000449954 H0YIV9 168 aa6.72□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF195O14628 629 aa6.72□□□□□ -1.33
LINC01961-201ENST00000449954 DHHO43323 396 aa6.72□□□□□ -1.33
LINC01961-201ENST00000449954 XPNPEP2O43895 674 aa6.72□□□□□ -1.33
LINC01961-201ENST00000449954 PLOD3O60568 738 aa6.72□□□□□ -1.33
LINC01961-201ENST00000449954 MRPL33O75394 65 aaKnown RBP6.72□□□□□ -1.33
LINC01961-201ENST00000449954 RP2O75695 350 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms