RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 IFNA21P01568 189 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 CCNOP22674 350 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 ARHGDIBP52566 201 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 PDX1P52945 283 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 GUCA2AQ02747 115 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 POU4F3Q15319 338 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 FAM189A2Q15884 450 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 CTF1Q16619 201 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 C3orf38Q5JPI3 329 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 FAM69BQ5VUD6 431 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 ASTLQ6HA08 431 aaPredicted RBP6.67□□□□□ -1.34
BEST1-202ENST00000449131 RAB12Q6IQ22 244 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 SLC18B1Q6NT16 456 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 TMEM184AQ6ZMB5 413 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 PRICKLE2Q7Z3G6 844 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 LRRC56Q8IYG6 542 aaPredicted RBP6.67□□□□□ -1.34
BEST1-202ENST00000449131 FTMTQ8N4E7 242 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 OR52I1Q8NGK6 324 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 TMEM255BQ8WV15 326 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 TRIM43Q96BQ3 446 aaPredicted RBP6.67□□□□□ -1.34
BEST1-202ENST00000449131 EID2BQ96D98 161 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 NXPE2Q96DL1 559 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 KLHL15Q96M94 604 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 CDCA3Q99618 268 aaPredicted RBP6.67□□□□□ -1.34
BEST1-202ENST00000449131 ASB6Q9NWX5 421 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 ABI3Q9P2A4 366 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 ASB4Q9Y574 426 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 CACNG2Q9Y698 323 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 ATAD5Q96QE3 1844 aa6.67□□□□□ -1.34
BEST1-202ENST00000449131 DCDC2BA2VCK2 349 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 LRIT2A6NDA9 550 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 VSTM2BA6NLU5 285 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 MAN2B1O00754 1011 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 TP53I11O14683 189 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 SULT1C4O75897 302 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 APEHP13798 732 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 EIF5AP63241 154 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 MAT1AQ00266 395 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 SELENBP1Q13228 472 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 SQSTM1Q13501 440 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 RAB11BQ15907 218 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 VASH1Q7L8A9 365 aaPredicted RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 TECPR1Q7Z6L1 1165 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 CCDC28AQ8IWP9 274 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 LAS2Q8IYD9 372 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 OR13C3Q8NGS6 347 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 OR5J2Q8NH18 312 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 FOXN4Q96NZ1 517 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 HHIPQ96QV1 700 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 OR1F2PQ96R84 312 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 LPAR4Q99677 370 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.66□□□□□ -1.34
BEST1-202ENST00000449131 FGF22Q9HCT0 170 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 CD93Q9NPY3 652 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 C1GALT1Q9NS00 363 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 SAGE1Q9NXZ1 904 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 UBQLN2Q9UHD9 624 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 DIMT1Q9UNQ2 313 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 ALG5Q9Y673 324 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 RTTNQ86VV8 2226 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 ANKRD34BA5PLL1 514 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 H3BML4 177 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 SYT5O00445 386 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 HOXC11O43248 304 aaPredicted RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 RP2O75695 350 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 CXCL10P02778 98 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 PNMTP11086 282 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 UBL4AP11441 157 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 GIFP27352 417 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 GABRA5P31644 462 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 TRIM23P36406 574 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 EIF2DP41214 584 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 CTBP2P56545 445 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 CRMP1Q14194 572 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 ZNF322Q6U7Q0 402 aaPredicted RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 SGPP1Q9BX95 441 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 SLC23A2Q9UGH3 650 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 DKKL1Q9UK85 242 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 CBLCQ9ULV8 474 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 A0A1W2PR48 441 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 HYAL3O43820 417 aaPredicted RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 LCMT2O60294 686 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 F13BP05160 661 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 SHC1P29353 583 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 HNRNPFP52597 415 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 RNASE10Q5GAN6 216 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 NKAPLQ5M9Q1 402 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 TCEAL6Q6IPX3 200 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 MBOAT2Q6ZWT7 520 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 GDF7Q7Z4P5 450 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 NKAIN4Q8IVV8 208 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 GPR148Q8TDV2 347 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 DIO2Q92813 273 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 TMEM185BQ9H7F4 350 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 LMAN1LQ9HAT1 526 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 TREM1Q9NP99 234 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 HPF1Q9NWY4 346 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 LUZP4Q9P127 313 aa6.66□□□□□ -1.34
BEST1-202ENST00000449131 TESQ9UGI8 421 aaKnown RBP6.66□□□□□ -1.34
BEST1-202ENST00000449131 TBX21Q9UL17 535 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms