RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 QSOX2Q6ZRP7 698 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 SAMD14Q8IZD0 417 aaPredicted RBP13.63□□□□□ -0.23
SF1-211ENST00000448404 OR52L1Q8NGH7 329 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 NEIL3Q8TAT5 605 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 VSTM2LQ96N03 204 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 TSSK2Q96PF2 358 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 RTN4RQ9BZR6 473 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 CPNE5Q9HCH3 593 aa13.63□□□□□ -0.23
SF1-211ENST00000448404 A0A087WV62 115 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 A0A0B4J203 849 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 MCIDASD6RGH6 385 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 TMCC2O75069 709 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 THBS1P07996 1170 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 PAICSP22234 425 aaKnown RBP13.62□□□□□ -0.23
SF1-211ENST00000448404 BMP8BP34820 402 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 CASP3P42574 277 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 OR1D5P58170 312 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 TPBGQ13641 420 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 FHL1Q13642 323 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 CD226Q15762 336 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 EIPR1Q53HC9 387 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 EXOSC6Q5RKV6 272 aaKnown RBP13.62□□□□□ -0.23
SF1-211ENST00000448404 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
SF1-211ENST00000448404 FAAH2Q6GMR7 532 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 APOOLQ6UXV4 268 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 LINC00299Q6ZSB3 139 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 BMP8AQ7Z5Y6 402 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 OR52E2Q8NGJ4 325 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 OR5M3Q8NGP4 307 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 HSPA12BQ96MM6 686 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 NECTIN4Q96NY8 510 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 OR8D2Q9GZM6 311 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 BOLA1Q9Y3E2 137 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 PCNX3Q9H6A9 2034 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 A0A0B4J2E0 115 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 A0A1B0GX12 115 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 FABP12A6NFH5 140 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 IDSB3KWA1 339 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 RGS13O14921 159 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 AGR2O95994 175 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 SHC1P29353 583 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 PRTGQ2VWP7 1150 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 TP53I3Q53FA7 332 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 RFPL4BQ6ZWI9 263 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 CLDN22Q8N7P3 220 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 OR5J2Q8NH18 312 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 OR51Q1Q8NH59 317 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 ERMAPQ96PL5 475 aaPredicted RBP13.62□□□□□ -0.23
SF1-211ENST00000448404 SRRQ9GZT4 340 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 TMEM27Q9HBJ8 222 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 MCCC2Q9HCC0 563 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 UGT2A1Q9Y4X1 527 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 ZDBF2Q9HCK1 2354 aa13.62□□□□□ -0.23
SF1-211ENST00000448404 COL4A2P08572 1712 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 DAPL1A0PJW8 107 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 CHURC1-FNTBB4DL54 471 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 STK25O00506 426 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 KRT8P05787 483 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 HIST1H1CP16403 213 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 RPS27P42677 84 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 FNTBP49356 437 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 RPL6Q02878 288 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 DSG2Q14126 1118 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 PYDC2Q56P42 97 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 RNASE12Q5GAN4 147 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 VWA2Q5GFL6 755 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 C16orf47Q6ZP98 133 aaPredicted RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 KLHL36Q8N4N3 616 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 C4orf36Q96KX1 117 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 DGAT2Q96PD7 388 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 GAL3ST4Q96RP7 486 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 TEAD3Q99594 435 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 RNF32Q9H0A6 362 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 FSCN3Q9NQT6 498 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 DDX28Q9NUL7 540 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 CRNNQ9UBG3 495 aaPredicted RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 ZMIZ1Q9ULJ6 1067 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 PAHP00439 452 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 RNH1P13489 461 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 CTBP2P56545 445 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 CDC20Q12834 499 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 ARIH2OSQ8N7S6 290 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 BCORP1Q8N888 145 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 RFKQ969G6 155 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 RASD2Q96D21 266 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 DMRTB1Q96MA1 342 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 STACQ99469 402 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 MRPS18AQ9NVS2 196 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 EXOSC1Q9Y3B2 195 aaKnown RBP13.61□□□□□ -0.23
SF1-211ENST00000448404 IER3IP1Q9Y5U9 82 aa13.61□□□□□ -0.23
SF1-211ENST00000448404 A0A075B6Q4 140 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 A0A1W2PRG6 482 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 SAGE2PA6NJ88 616 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 PRR23D1E9PI22 279 aaPredicted RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 H7C1C5 153 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CSTAP01040 98 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CSF3P09919 207 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 PRR23D2P0DMB1 279 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms