RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 SLC25A3Q00325 362 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 DMTNQ08495 405 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 PMPCAQ10713 525 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 LRRC23Q53EV4 343 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 SAMD4BQ5PRF9 694 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 POMZP3Q6PJE2 187 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 ATP6V1C2Q8NEY4 427 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 KLHL15Q96M94 604 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 NPAS1Q99742 590 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TUBA1CQ9BQE3 449 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CHRNA9Q9UGM1 479 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 FAM215AQ9Y5M1 114 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 NBASA2RRP1 2371 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 ZNF407Q9C0G0 2248 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TPST1O60507 370 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 ZG16O60844 167 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 ADAM11O75078 769 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 GCM2O75603 506 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 LGI1O95970 557 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 LDLRP01130 860 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TACR3P29371 465 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TIMP3P35625 211 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CLDN15P56746 228 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 DUSP7Q16829 419 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TMEM176BQ3YBM2 270 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 SPATS1Q496A3 300 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 HBMQ6B0K9 141 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 RTL6Q6ICC9 239 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 XKRXQ6PP77 449 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CLEC18BQ6UXF7 455 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 P4HA3Q7Z4N8 544 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 GGNQ86UU5 652 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 DEFB107AQ8IZN7 70 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 OR52E4Q8NGH9 312 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 OR2V1Q8NHB1 315 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 ASB5Q8WWX0 329 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 FIG4Q92562 907 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TAMM41Q96BW9 452 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TM9SF2Q99805 663 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 PRRG4Q9BZD6 226 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 TRIM2Q9C040 744 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 CTPS2Q9NRF8 586 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 ADPRHL2Q9NX46 363 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 SELENONQ9NZV5 590 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 MCTS1Q9ULC4 181 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 USP22Q9UPT9 525 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 SLC9A8Q9Y2E8 581 aa11.78□□□□□ -0.52
ERGIC3-209ENST00000447986 PRRC2CQ9Y520 2896 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 HSPB2A8KAH6 182 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 CXCR6O00574 342 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 FRS3O43559 492 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 SYNGR4O95473 234 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 FESP07332 822 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 GLI4P10075 376 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 TFPIP10646 304 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 FCGR2AP12318 317 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 PRG2P13727 222 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 AGAP20933 346 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 CXCR1P25024 350 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 CARD18P57730 90 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 NUP107P57740 925 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 HSPB2Q16082 182 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 OCLNQ16625 522 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 SYT14P1Q58G82 188 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 RIPPLY2Q5TAB7 128 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 PPP4R4Q6NUP7 873 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 MRGPRGQ86SM5 289 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 RPRMLQ8N4K4 120 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 LSMEM1Q8N8F7 131 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 OR10D3Q8NH80 312 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 FAM162AQ96A26 154 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 CDRT15Q96T59 188 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 ZNF559Q9BR84 538 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 TMEM27Q9HBJ8 222 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 ZNF175Q9Y473 711 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 POLEQ07864 2286 aa11.77□□□□□ -0.53
ERGIC3-209ENST00000447986 DNAJC13O75165 2243 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 TMED7-TICAM2A0A0A6YYA0 188 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 MBD3L4A6NDZ8 208 aaPredicted RBP11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 MBD3L3A6NE82 208 aaPredicted RBP11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 WIPF3A6NGB9 483 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 MBD3L5A6NJ08 208 aaPredicted RBP11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 H0YC42 278 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 TNFSF11O14788 317 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 OPN1LWP04000 364 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 IL11P20809 199 aa11.76□□□□□ -0.53
ERGIC3-209ENST00000447986 HTR1EP28566 365 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms