RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PRSS53Q2L4Q9 553 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 TMEM176BQ3YBM2 270 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-203ENST00000447360 CCDC153Q494R4 210 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 RPS26P11Q5JNZ5 115 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-203ENST00000447360 HIST2H2BDQ6DRA6 164 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 WDR93Q6P2C0 686 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 SLC46A3Q7Z3Q1 461 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 GALNT5Q7Z7M9 940 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 C4orf33Q8N1A6 199 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 TEX29Q8N6K0 151 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 C1orf52Q8N6N3 182 aaKnown RBP6.19□□□□□ -1.42
LRRC28-203ENST00000447360 CCNYL1Q8N7R7 359 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 ANKS4BQ8N8V4 417 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 TOR1AIP2Q8NFQ8 470 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 ZFP90Q8TF47 636 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 BBS4Q96RK4 519 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 VRK1Q99986 396 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-203ENST00000447360 ACPTQ9BZG2 426 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 RAB1BQ9H0U4 201 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 COQ10BQ9H8M1 238 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 PPCSQ9HAB8 311 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 BRD7Q9NPI1 651 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 ASB6Q9NWX5 421 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 SIRT5Q9NXA8 310 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 TAS2R16Q9NYV7 291 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.19□□□□□ -1.42
LRRC28-203ENST00000447360 MCM8Q9UJA3 840 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 USP22Q9UPT9 525 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 SPEF1Q9Y4P9 236 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 CCL27Q9Y4X3 112 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 PCDHB14Q9Y5E9 798 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 PCDHGB1Q9Y5G3 927 aa6.19□□□□□ -1.42
LRRC28-203ENST00000447360 V9GYY5 206 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-203ENST00000447360 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 IGHV3-15A0A0B4J1V0 119 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 A0A1W2PNR3 127 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 MYO1GB0I1T2 1018 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 C9JVG2 144 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 COPEO14579 308 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 PDPK1O15530 556 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 EFNA2O43921 213 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 FBXO24O75426 580 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 PDE5AO76074 875 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 SLU7O95391 586 aaKnown RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 IGKV1D-16P01601 117 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ENO1P06733 434 aaKnown RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 IFI6P09912 130 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 MYL2P10916 166 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 DAOP14920 347 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 CPA3P15088 417 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 HPGDP15428 266 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 PGCP20142 388 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 HMOX2P30519 316 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 SLC7A1P30825 629 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 LCN1P31025 176 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GABRA3P34903 492 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GSTM5P46439 218 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GIPRP48546 466 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 KHKP50053 298 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 PPOXP50336 477 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 IDH3GP51553 393 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 BTKQ06187 659 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 FOXF1Q12946 379 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 RIN1Q13671 783 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 KIAA0040Q15053 153 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GABRA6Q16445 453 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 VPS26BQ4G0F5 336 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GALNT18Q6P9A2 607 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 SHQ1Q6PI26 577 aaKnown RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 TMEM107Q6UX40 140 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 FRMD7Q6ZUT3 714 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 TRIM46Q7Z4K8 759 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GLCCI1Q86VQ1 547 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 C10orf107Q8IVU9 208 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 UBE2J2Q8N2K1 259 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ZNF786Q8N393 782 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 C17orf78Q8N4C9 275 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 B4GALNT2Q8NHY0 566 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 C16orf78Q8WTQ4 265 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 NEU4Q8WWR8 484 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 HOXB13Q92826 284 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 MRPL24Q96A35 216 aaKnown RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ZNF775Q96BV0 537 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ELP4Q96EB1 424 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 CCDC126Q96EE4 140 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 SH3YL1Q96HL8 342 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ZNF300Q96RE9 604 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 SNX18Q96RF0 628 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GATA5Q9BWX5 397 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 MID1IP1Q9NPA3 183 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 UBQLN4Q9NRR5 601 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 DDX18Q9NVP1 670 aaKnown RBP6.18□□□□□ -1.42
LRRC28-203ENST00000447360 HIF1ANQ9NWT6 349 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 EMC3Q9P0I2 261 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 MALT1Q9UDY8 824 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 GRIP1Q9Y3R0 1128 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 TRAF6Q9Y4K3 522 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ACTL7BQ9Y614 415 aa6.18□□□□□ -1.42
LRRC28-203ENST00000447360 ARFGEF3Q5TH69 2177 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms