RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ADAM19Q9H013 955 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 LDAHQ9H6V9 325 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 EXO5Q9H790 373 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 RIMS3Q9UJD0 308 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 OSGIN1Q9UJX0 560 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 SLC7A7Q9UM01 511 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 FAM32AQ9Y421 112 aaKnown RBP16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 TESMINQ9Y4I5 508 aa16.27■□□□□ 0.2
TRAPPC4-203ENST00000447216 TMED7-TICAM2A0A0A6YYA0 188 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 TTLL8A6PVC2 850 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ETV2O00321 342 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNHIT1O43257 154 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 PRSS23O95084 383 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 OR5F1O95221 314 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 OPN1LWP04000 364 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ITGA2P17301 1181 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 RHCEP18577 417 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 POLR2HP52434 150 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 DLX5P56178 289 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 HSF1Q00613 529 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 GLYR1Q49A26 553 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ALG10BQ5I7T1 473 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNF324BQ6AW86 544 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNF613Q6PF04 617 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 TRILQ7L0X0 811 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 PIWIL3Q7Z3Z3 882 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ATG4DQ86TL0 474 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 PAPD5Q8NDF8 572 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 DUS3LQ96G46 650 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 TMEM185BQ9H7F4 350 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ACKR4Q9NPB9 350 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 ASF1BQ9NVP2 202 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 SELENONQ9NZV5 590 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 TMED7Q9Y3B3 224 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 AP4S1Q9Y587 144 aa16.26■□□□□ 0.19
TRAPPC4-203ENST00000447216 TRGV5A0A0B4J1U4 118 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 TMEM72A0PK05 275 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 C7orf72A4D263 438 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 PEPDP12955 493 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNF17P17021 662 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 EIF1P41567 113 aaKnown RBP16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 STARP49675 285 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 SPIBQ01892 262 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 ULK3Q6PHR2 472 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 WDR88Q6ZMY6 472 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 ADGRG3Q86Y34 549 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 P3H2Q8IVL5 708 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 NKAIN4Q8IVV8 208 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 DNAJA4Q8WW22 397 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 SMPDL3BQ92485 455 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 NR4A3Q92570 626 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 PIP5K1AQ99755 562 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 PIGQQ9BRB3 760 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 FNDC11Q9BVV2 318 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 POLR2J2Q9GZM3 115 aaKnown RBP16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 POLR2J3Q9H1A7 115 aaKnown RBP16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 VNN3Q9NY84 501 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 SPRR3Q9UBC9 169 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 TNFRSF10DQ9UBN6 386 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 ACAD8Q9UKU7 415 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNF337Q9Y3M9 751 aa16.25■□□□□ 0.19
TRAPPC4-203ENST00000447216 SPENQ96T58 3664 aaKnown RBP16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 ELOA3DA6NLF2 546 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 H3BML4 177 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 CHP2O43745 196 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 KRT36O76013 467 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 IGHG3P01860 377 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 CXCR1P25024 350 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 SHC1P29353 583 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 RRM2P31350 389 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 APOBEC1P41238 236 aaKnown RBP16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 HTR3AP46098 478 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 MLLT10P55197 1068 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 GFRA1P56159 465 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 ELF3P78545 371 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 PPP1R8Q12972 351 aaKnown RBP16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 ELOA3BQ3SY89 546 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 DCST1Q5T197 706 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNF605Q86T29 641 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 OFCC1Q8IZS5 231 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 PIK3C3Q8NEB9 887 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 ELOA3Q8NG57 546 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 OR52J3Q8NH60 311 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 NEIL3Q8TAT5 605 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 FAR1Q8WVX9 515 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 SLC38A4Q969I6 547 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 DNAJA3Q96EY1 480 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 PRSS27Q9BQR3 290 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 NMNAT1Q9HAN9 279 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 MAN2C1Q9NTJ4 1040 aa16.24■□□□□ 0.19
TRAPPC4-203ENST00000447216 H3BNX3 289 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 SUSD5O60279 629 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 CST1P01037 141 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 H1F0P07305 194 aaKnown RBP16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 BMP7P18075 431 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 ADH6P28332 368 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 IFNA8P32881 189 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 SFTPDP35247 375 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 ST3GAL3Q11203 375 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 OR2T5Q6IEZ7 315 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms