RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 THBS1P07996 1170 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 PABPC4LP0CB38 370 aaKnown RBP13.27□□□□□ -0.29
HDAC4-204ENST00000446876 FCGR2AP12318 317 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 AQP1P29972 269 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 CPOXP36551 454 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 CPA2P48052 419 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 SCARB2Q14108 478 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 LARS2Q15031 903 aaKnown RBP13.27□□□□□ -0.29
HDAC4-204ENST00000446876 GUSBP1Q15486 140 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 ADRM1Q16186 407 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF311Q5JNZ3 666 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 RNF220Q5VTB9 566 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 PRAMEF8Q5VWM4 474 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 PRAMEF7Q5VXH5 474 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 GRINAQ7Z429 371 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 GDF7Q7Z4P5 450 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 SERPINA11Q86U17 422 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 COMTD1Q86VU5 262 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 PTOV1Q86YD1 416 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 RBM24Q9BX46 236 aaKnown RBP13.27□□□□□ -0.29
HDAC4-204ENST00000446876 OR11A1Q9GZK7 315 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 FAM107BQ9H098 131 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 CACYBPQ9HB71 228 aaKnown RBP13.27□□□□□ -0.29
HDAC4-204ENST00000446876 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-204ENST00000446876 GALNT8Q9NY28 637 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 CORO2BQ9UQ03 480 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 CAPN7Q9Y6W3 813 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 NAV2Q8IVL1 2488 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 FBN2P35556 2912 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 LOC100653049A0A140TA62 436 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 FXYD1O00168 92 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 MRASO14807 208 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 KRT34O76011 436 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 PLGP00747 810 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-204ENST00000446876 CRHP06850 196 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 TFPIP10646 304 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 ENPP1P22413 925 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 ACAA2P42765 397 aaKnown RBP13.26□□□□□ -0.29
HDAC4-204ENST00000446876 HOXC5Q00444 222 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 MYBPHQ13203 477 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 CYP51A1Q16850 503 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 TRMT5Q32P41 509 aaKnown RBP13.26□□□□□ -0.29
HDAC4-204ENST00000446876 SYT14P1Q58G82 188 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 REEP3Q6NUK4 255 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 ADGRG3Q86Y34 549 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 CADM2Q8N3J6 435 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 POU5F2Q8N7G0 328 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 RNF128Q8TEB7 428 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 ABHD3Q8WU67 409 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 CPNE4Q96A23 557 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-204ENST00000446876 ELAC2Q9BQ52 826 aaKnown RBP13.26□□□□□ -0.29
HDAC4-204ENST00000446876 PIGMQ9H3S5 423 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 PIF1Q9H611 641 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 TMEM38AQ9H6F2 299 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 SERINC1Q9NRX5 453 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 CHRNA9Q9UGM1 479 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 ITPR2Q14571 2701 aa13.26□□□□□ -0.29
HDAC4-204ENST00000446876 TMED7-TICAM2A0A0A6YYA0 188 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 TMEM72A0PK05 275 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 A8MXE2 369 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 TPST1O60507 370 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 SS18L1O75177 396 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-204ENST00000446876 CGAP01215 116 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 ETS2P15036 469 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 TACR3P29371 465 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
HDAC4-204ENST00000446876 KRTAP10-9P60411 292 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 TLE4Q04727 773 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 MMEL1Q495T6 779 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 RABL3Q5HYI8 236 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF474Q6S9Z5 364 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-204ENST00000446876 FAM214BQ7L5A3 538 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 SPATA21Q7Z572 469 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 ZZZ3Q8IYH5 903 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF440Q8IYI8 595 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 LRRC46Q96FV0 321 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-204ENST00000446876 ARL5BQ96KC2 179 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 CRIM1Q9NZV1 1036 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 OSGIN1Q9UJX0 560 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF232Q9UNY5 417 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 IFT52Q9Y366 437 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 TMED7Q9Y3B3 224 aa13.25□□□□□ -0.29
HDAC4-204ENST00000446876 FAAHO00519 579 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 MSTNO14793 375 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 OPN1SWP03999 348 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 FESP07332 822 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 UQCRBP14927 111 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 DRD4P21917 467 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 SLC6A2P23975 617 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 LSP1P33241 339 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 SLC1A3P43003 542 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 KIR2DL3P43628 341 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 DIO1P49895 249 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 POLR2HP52434 150 aaKnown RBP13.24□□□□□ -0.29
HDAC4-204ENST00000446876 CTBP2P56545 445 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms