RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ZDHHC12Q96GR4 267 aa15.47■□□□□ 0.07
LAPTM4B-201ENST00000445593 NXF5Q9H1B4 397 aaKnown RBP15.47■□□□□ 0.07
LAPTM4B-201ENST00000445593 KLHL1Q9NR64 748 aa15.47■□□□□ 0.07
LAPTM4B-201ENST00000445593 BCAT2O15382 392 aaPredicted RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 SOX30O94993 753 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 TNFSF8P32971 234 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 GABRA4P48169 554 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 CD226Q15762 336 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 ZCCHC12Q6PEW1 402 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 C19orf48Q6RUI8 117 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 RPTNQ6XPR3 784 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 LYSMD2Q8IV50 215 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 SLC25A45Q8N413 288 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 FAM98AQ8NCA5 519 aaKnown RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 OR1L3Q8NH93 324 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 ERMAPQ96PL5 475 aaPredicted RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 ZNF559Q9BR84 538 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 CCDC59Q9P031 241 aaKnown RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 FREM2Q5SZK8 3169 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 MED12Q93074 2177 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 LILRA5A6NI73 299 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 PRR23D1E9PI22 279 aaPredicted RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 H3BUI4 141 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 BHLHE40O14503 412 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 UPK1BO75841 260 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 AK1P00568 194 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 PRR23D2P0DMB1 279 aaPredicted RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 DRD5P21918 477 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 CSF2RBP32927 897 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 DHPSP49366 369 aaPredicted RBP15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 GRM7Q14831 915 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 PLEKHG7Q6ZR37 379 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 OR52E2Q8NGJ4 325 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 OR4C6Q8NH72 309 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 DPYSL5Q9BPU6 564 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 TIGARQ9NQ88 270 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 ITGB1BP2Q9UKP3 347 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 B3GNT3Q9Y2A9 372 aa15.46■□□□□ 0.07
LAPTM4B-201ENST00000445593 HMGN1P05114 100 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 NAA10P41227 235 aaPredicted RBP15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 EFNA3P52797 238 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 COPZ1P61923 177 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 EXOSC6Q5RKV6 272 aaKnown RBP15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 NXNL2Q5VZ03 156 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 LYPD4Q6UWN0 246 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 OR5M3Q8NGP4 307 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 THAP3Q8WTV1 239 aaPredicted RBP15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 PTP4A1Q93096 173 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 ZMYND19Q96E35 227 aaPredicted RBP15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 DEPDC7Q96QD5 511 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 COMMD3Q9UBI1 195 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 COLQQ9Y215 455 aaPredicted RBP15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 PEX16Q9Y5Y5 336 aa15.46■□□□□ 0.06
LAPTM4B-201ENST00000445593 GPR179Q6PRD1 2367 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 FAM86C2PA6NEL3 165 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 ZNF670-ZNF695F2Z2N8 137 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 SLC30A4O14863 429 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 CASKO14936 926 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 SPNP16150 400 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 RORCP51449 518 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 LIMK1P53667 647 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 C16orf47Q6ZP98 133 aaPredicted RBP15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 SPATC1Q76KD6 591 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 MARCH9Q86YJ5 346 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 GRAMD2AQ8IUY3 354 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 GPR135Q8IZ08 494 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 KLHL36Q8N4N3 616 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 RFLNBQ8N5W9 214 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 LMF2Q9BU23 707 aaKnown RBP15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 MROQ9BYG7 248 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 PCDHGB6Q9Y5F9 930 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 IGHV1OR21-1A0A087WYE8 117 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 TNFRSF10AO00220 468 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 ZNF749O43361 778 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 CHP2O43745 196 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 CPEP16870 476 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 GRPRP30550 384 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 HTR1FP30939 366 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 NR4A2P43354 598 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 PRKCDQ05655 676 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 NSDHLQ15738 373 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 STK11Q15831 433 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 PRPF38BQ5VTL8 546 aaKnown RBP15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 NIPAL3Q6P499 406 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 ARL9Q6T311 187 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 MRGPREQ86SM8 312 aa15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 ZNF346Q9UL40 294 aaKnown RBP15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 EXOSC1Q9Y3B2 195 aaKnown RBP15.45■□□□□ 0.06
LAPTM4B-201ENST00000445593 A0A1W2PPK0 400 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 DAPL1A0PJW8 107 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 RIIAD1A6NNX1 92 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 BLOC1S5-TXNDC5H3BN57 136 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 PSMD9O00233 223 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 RCBTB2O95199 551 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 ATP12AP54707 1039 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 DSG2Q14126 1118 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 BCL2A1Q16548 175 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 FAM27D1Q5T7N8 215 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 ARHGAP40Q5TG30 622 aa15.44■□□□□ 0.06
LAPTM4B-201ENST00000445593 ATP6V1C2Q8NEY4 427 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms