RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SLC7A13Q8TCU3 470 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 CENPNQ96H22 339 aaPredicted RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 FNDC11Q9BVV2 318 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 OR2B2Q9GZK3 357 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ZDHHC11Q9H8X9 412 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 B4GALT7Q9UBV7 327 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 SLC7A7Q9UM01 511 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ATRXP46100 2492 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 H0Y3Z8 333 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 LDLRP01130 860 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 GP1BBP13224 206 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 ANPEPP15144 967 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 EIF1P41567 113 aaKnown RBP13.68□□□□□ -0.22
CCNE1-203ENST00000444983 MAGEA5P43359 124 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 HTR3AP46098 478 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 PMP22Q01453 160 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 GK3PQ14409 553 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 INAQ16352 499 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 ST3GAL2Q16842 350 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 TMEM179BQ7Z7N9 219 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 AMIGO2Q86SJ2 522 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 SLC22A16Q86VW1 577 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 LSRQ86X29 649 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-203ENST00000444983 NKAIN4Q8IVV8 208 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 FAM98AQ8NCA5 519 aaKnown RBP13.68□□□□□ -0.22
CCNE1-203ENST00000444983 FAM83FQ8NEG4 500 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-203ENST00000444983 MPP4Q96JB8 637 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 EPYCQ99645 322 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 BDH2Q9BUT1 245 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 ACKR4Q9NPB9 350 aa13.68□□□□□ -0.22
CCNE1-203ENST00000444983 C6orf203Q9P0P8 240 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-203ENST00000444983 NKX1-2Q9UD57 310 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-203ENST00000444983 GADD45GO95257 159 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 RASAL1O95294 804 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 CELA3AP09093 270 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 PNMTP11086 282 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 ZNF17P17021 662 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 HK1P19367 917 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 GDF1P27539 372 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 APOBEC1P41238 236 aaKnown RBP13.67□□□□□ -0.22
CCNE1-203ENST00000444983 IST1P53990 364 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 PPIAP62937 165 aaKnown RBP13.67□□□□□ -0.22
CCNE1-203ENST00000444983 FOXF1Q12946 379 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 TRAM2Q15035 370 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 SEC23BQ15437 767 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 FAM109AQ8N4B1 249 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
CCNE1-203ENST00000444983 SLC25A18Q9H1K4 315 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 SEMA6AQ9H2E6 1030 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 REEP1Q9H902 201 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 RPS6KB2Q9UBS0 482 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 MED12Q93074 2177 aa13.67□□□□□ -0.22
CCNE1-203ENST00000444983 A0A087WUU8 490 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 TRBV4-1A0A0J9YWV2 114 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 FAM166BA8MTA8 275 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 NPIPB7O75200 414 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 SFTPCP11686 197 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 IL11P20809 199 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 IFNA8P32881 189 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 POLR2HP52434 150 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 MAP2K6P52564 334 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 GFRA1P56159 465 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 SMIM11AP58511 58 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 SPIBQ01892 262 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 PLGLB1Q02325 96 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 EGR4Q05215 589 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 PPP1R8Q12972 351 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 SIAH3Q8IW03 269 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 DTNBP1Q96EV8 351 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 WBP1Q96G27 269 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 DKKL1Q9UK85 242 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 U3KQV3 271 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 MPDZO75970 2070 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 ZNF407Q9C0G0 2248 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 TMED7-TICAM2A0A0A6YYA0 188 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 OR2M5A3KFT3 312 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 ACOT7O00154 380 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 TNFRSF11BO00300 401 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 ATP6V1G2O95670 118 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 DNAJA1P31689 397 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 RBM34P42696 430 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 MERTKQ12866 999 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 EXOC3L2Q2M3D2 409 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 ZNF770Q6IQ21 691 aaPredicted RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 PODNL1Q6PEZ8 512 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 YRDCQ86U90 279 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 TMEM255BQ8WV15 326 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 ACOT11Q8WXI4 607 aaPredicted RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 NRBF2Q96F24 287 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 ALPK1Q96QP1 1244 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 BARD1Q99728 777 aaKnown RBP13.66□□□□□ -0.22
CCNE1-203ENST00000444983 TMEM43Q9BTV4 400 aa13.66□□□□□ -0.22
CCNE1-203ENST00000444983 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms