RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 PRAMEF27A3QJZ7 478 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 ETV2O00321 342 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 ADAMDEC1O15204 470 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 COX4I1P13073 169 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 PCGF2P35227 344 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 SLC1A3P43003 542 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 IDH2P48735 452 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 MTPNP58546 118 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 NDUFAF6Q330K2 333 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 WBP2NLQ6ICG8 309 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 NANOGP8Q6NSW7 305 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 DHRS4L2Q6PKH6 230 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 RETREG3Q86VR2 466 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 KIF18BQ86Y91 864 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 SLC43A2Q8N370 569 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 MARVELD2Q8N4S9 558 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 OR5M1Q8NGP8 315 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 MAL2Q969L2 176 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 QRSL1Q9H0R6 528 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 KAT8Q9H7Z6 458 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 NANOGQ9H9S0 305 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 DNAJB12Q9NXW2 375 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 ARMCX1Q9P291 453 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 CLCF1Q9UBD9 225 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 CHRNA9Q9UGM1 479 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 EMC9Q9Y3B6 208 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 A0A0G2JNJ9 132 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 FAM90A27PA6NNH2 459 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 C17orf51A8MQB3 221 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 GMNNO75496 209 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 TFPIP10646 304 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 COX6B1P14854 86 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 CXCR1P25024 350 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 PSMA4P25789 261 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 SFTPDP35247 375 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 ASCL1P50553 236 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 RNF144AP50876 292 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 DLX5P56178 289 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 CTBP2P56545 445 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 EPS8Q12929 822 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 PON3Q15166 354 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 RNPS1Q15287 305 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 TMEM176BQ3YBM2 270 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 RPS26P11Q5JNZ5 115 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 HACD2Q6Y1H2 254 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 ZNF836Q6ZNA1 936 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 PLEKHM3Q6ZWE6 761 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 OLIG3Q7RTU3 272 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 NET1Q7Z628 596 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 ADGRE4PQ86SQ3 457 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 RANBP3LQ86VV4 465 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 CCDC71Q8IV32 467 aaPredicted RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 OR10A6Q8NH74 314 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 OR10D3Q8NH80 312 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 CNOT9Q92600 299 aaKnown RBP11.03□□□□□ -0.64
LTBR-204ENST00000444814 OSTF1Q92882 214 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 ZG16BQ96DA0 208 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 Q9UFV3 132 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 HDGFL3Q9Y3E1 203 aa11.03□□□□□ -0.64
LTBR-204ENST00000444814 NUP214P35658 2090 aaPredicted RBP11.02□□□□□ -0.64
LTBR-204ENST00000444814 BOLA2-SMG1P6H3BVE0 249 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 FBP2O00757 339 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 TNFSF11O14788 317 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 AIM2O14862 343 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 ZNF208O43345 1280 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 HNRNPRO43390 633 aaKnown RBP11.02□□□□□ -0.65
LTBR-204ENST00000444814 OIP5O43482 229 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 DNPH1O43598 174 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 NTN1O95631 604 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 BMP5P22003 454 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 CLDN20P56880 219 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 VEZF1Q14119 521 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 VMACQ2NL98 169 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
LTBR-204ENST00000444814 C5orf46Q6UWT4 87 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 STK32CQ86UX6 486 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 CADM2Q8N3J6 435 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 RPRMLQ8N4K4 120 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 ATP6V1C2Q8NEY4 427 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 RCN3Q96D15 328 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 CCDC106Q9BWC9 280 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 TRIM2Q9C040 744 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 TMEM185BQ9H7F4 350 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 TMEM27Q9HBJ8 222 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 TESQ9UGI8 421 aaKnown RBP11.02□□□□□ -0.65
LTBR-204ENST00000444814 PACSIN3Q9UKS6 424 aa11.02□□□□□ -0.65
LTBR-204ENST00000444814 RRP15Q9Y3B9 282 aaKnown RBP11.02□□□□□ -0.65
LTBR-204ENST00000444814 MYO18BQ8IUG5 2567 aa11.01□□□□□ -0.65
LTBR-204ENST00000444814 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
LTBR-204ENST00000444814 GTF3C1Q12789 2109 aa11.01□□□□□ -0.65
LTBR-204ENST00000444814 CENPVL1A0A0U1RR11 272 aa11.01□□□□□ -0.65
LTBR-204ENST00000444814 FAM220BPB1ANY3 271 aa11.01□□□□□ -0.65
LTBR-204ENST00000444814 B4DXG7 233 aa11.01□□□□□ -0.65
LTBR-204ENST00000444814 SHISA8B8ZZ34 492 aa11.01□□□□□ -0.65
LTBR-204ENST00000444814 SYT5O00445 386 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms