RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TMPPEQ6ZT21 453 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 FBXW5Q969U6 566 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 ZNF300Q96RE9 604 aaPredicted RBP18.65■□□□□ 0.58
VSX1-206ENST00000444511 KCNK9Q9NPC2 374 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 MARCOQ9UEW3 520 aaPredicted RBP18.65■□□□□ 0.58
VSX1-206ENST00000444511 NUP214P35658 2090 aaPredicted RBP18.65■□□□□ 0.58
VSX1-206ENST00000444511 ZNF724A8MTY0 619 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 E9PBE3 544 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 ANKRD28O15084 1053 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 LYZL6O75951 148 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 S100A3P33764 101 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 RYKP34925 604 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 PGM1P36871 562 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 APOBEC1P41238 236 aaKnown RBP18.64■□□□□ 0.57
VSX1-206ENST00000444511 STX3Q13277 289 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 CASP8Q14790 479 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 STK11Q15831 433 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 FAM174BQ3ZCQ3 159 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 GPAT3Q53EU6 434 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 FRRS1Q6ZNA5 592 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 GALNT5Q7Z7M9 940 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 ZNF100Q8IYN0 542 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 LRRC34Q8IZ02 419 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 FAM71CQ8NEG0 241 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 LILRB1Q8NHL6 650 aaPredicted RBP18.64■□□□□ 0.57
VSX1-206ENST00000444511 NEURL3Q96EH8 262 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 SLC35A5Q9BS91 424 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 HAO1Q9UJM8 370 aa18.64■□□□□ 0.57
VSX1-206ENST00000444511 ROS1P08922 2347 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 BSPH1Q075Z2 132 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 FUT5Q11128 374 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 CEP85LQ5SZL2 805 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.63■□□□□ 0.57
VSX1-206ENST00000444511 PIWIL2Q8TC59 973 aaKnown RBP18.63■□□□□ 0.57
VSX1-206ENST00000444511 ZNF75CPQ92670 426 aaPredicted RBP18.63■□□□□ 0.57
VSX1-206ENST00000444511 ZHX1-C8orf76Q96EF9 292 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 PAIP2Q9BPZ3 127 aaKnown RBP18.63■□□□□ 0.57
VSX1-206ENST00000444511 PARD6BQ9BYG5 372 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 SAP130Q9H0E3 1048 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 MEAF6Q9HAF1 191 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 CTPS2Q9NRF8 586 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 EMC3Q9P0I2 261 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
VSX1-206ENST00000444511 HEATR5AQ86XA9 2040 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 ABCA2Q9BZC7 2435 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 NSD1Q96L73 2696 aaPredicted RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 BCAS1O75363 584 aaPredicted RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 EDNRAP25101 427 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 PCSK6P29122 969 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 NME5P56597 212 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 MPP2Q14168 576 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 PPA1Q15181 289 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 GRINAQ7Z429 371 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 HMGN2P46Q86SG4 172 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 ATG4DQ86TL0 474 aaPredicted RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 MTDHQ86UE4 582 aaKnown RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 SMAP2Q8WU79 429 aaPredicted RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 GTPBP3Q969Y2 492 aaKnown RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 MUCL1Q96DR8 90 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 TRMT61AQ96FX7 289 aaKnown RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 CCDC115Q96NT0 180 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 CCDC106Q9BWC9 280 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.62■□□□□ 0.57
VSX1-206ENST00000444511 PNPOQ9NVS9 261 aa18.62■□□□□ 0.57
VSX1-206ENST00000444511 A0A1W2PP18 115 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 SOD3P08294 240 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 GGT1P19440 569 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 KCNJ10P78508 379 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 CHRNEQ04844 493 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 ZNF672Q499Z4 452 aaPredicted RBP18.61■□□□□ 0.57
VSX1-206ENST00000444511 AP1ARQ63HQ0 302 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 ABLIM2Q6H8Q1 611 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 OGFOD2Q6N063 350 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 TRIML2Q8N7C3 387 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 KBTBD8Q8NFY9 601 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 NEUROG1Q92886 237 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 ZBTB9Q96C00 473 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 ZG16BQ96DA0 208 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 PANX1Q96RD7 426 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 EXOSC3Q9NQT5 275 aaKnown RBP18.61■□□□□ 0.57
VSX1-206ENST00000444511 BTNL2Q9UIR0 455 aa18.61■□□□□ 0.57
VSX1-206ENST00000444511 IGKV3D-15A0A087WSY6 115 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 DPRXA6NFQ7 191 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 CLDN24A6NM45 220 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 HMGN4O00479 90 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 DANCRP0C864 163 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 COX5AP20674 150 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 IGHV1-2P23083 117 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 FKBP2P26885 142 aaKnown RBP18.6■□□□□ 0.57
VSX1-206ENST00000444511 ANXA11P50995 505 aaKnown RBP18.6■□□□□ 0.57
VSX1-206ENST00000444511 UFM1P61960 85 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 PPP2R2BQ00005 443 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 BST1Q10588 318 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 PDK3Q15120 406 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 TIMM23BQ5SRD1 257 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 HHATQ5VTY9 493 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 SEZ6L2Q6UXD5 910 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 SSX8Q7RTT4 187 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 RNF130Q86XS8 419 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms