RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ACTR6Q9GZN1 396 aa17.89■□□□□ 0.45
LRCH3-208ENST00000443727 SLC38A1Q9H2H9 487 aa17.89■□□□□ 0.45
LRCH3-208ENST00000443727 EXOSC3Q9NQT5 275 aaKnown RBP17.89■□□□□ 0.45
LRCH3-208ENST00000443727 CTPS2Q9NRF8 586 aa17.89■□□□□ 0.45
LRCH3-208ENST00000443727 POLR3GO15318 223 aaPredicted RBP17.88■□□□□ 0.45
LRCH3-208ENST00000443727 SIAH2O43255 324 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 UQCRBP14927 111 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 MAGEA8P43361 318 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 IDH2P48735 452 aaKnown RBP17.88■□□□□ 0.45
LRCH3-208ENST00000443727 CSNK2A1P68400 391 aaPredicted RBP17.88■□□□□ 0.45
LRCH3-208ENST00000443727 RASGEF1BQ0VAM2 473 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 ALKBH2Q6NS38 261 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 EPGNQ6UW88 154 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 MSANTD1Q6ZTZ1 278 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 GRINAQ7Z429 371 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 OR9I1Q8NGQ6 314 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 WDR60Q8WVS4 1066 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 CNOT9Q92600 299 aaKnown RBP17.88■□□□□ 0.45
LRCH3-208ENST00000443727 VPS33AQ96AX1 596 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 UBTD1Q9HAC8 227 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 TCF7L2Q9NQB0 619 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 SLC6A13Q9NSD5 602 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 P2RX2Q9UBL9 471 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 CHRNA9Q9UGM1 479 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 GPR52Q9Y2T5 361 aa17.88■□□□□ 0.45
LRCH3-208ENST00000443727 PRRC2AP48634 2157 aaKnown RBP17.88■□□□□ 0.45
LRCH3-208ENST00000443727 FAM234BA2RU67 622 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 TMEM247A6NEH6 219 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 DBIP07108 87 aaKnown RBP17.87■□□□□ 0.45
LRCH3-208ENST00000443727 CD99P14209 185 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 NID1P14543 1247 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 CCNA2P20248 432 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 DIO1P49895 249 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 TFAP2EQ6VUC0 442 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 TMPPEQ6ZT21 453 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 CXorf67Q86X51 503 aaPredicted RBP17.87■□□□□ 0.45
LRCH3-208ENST00000443727 WFDC8Q8IUA0 241 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 TGIF2LYQ8IUE0 185 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 PEX5LQ8IYB4 626 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 STEAP2Q8NFT2 490 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 PMM1Q92871 262 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 ZHX1-C8orf76Q96EF9 292 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 CCDC106Q9BWC9 280 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 TPT1P8Q9HAU6 139 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 CACYBPQ9HB71 228 aaKnown RBP17.87■□□□□ 0.45
LRCH3-208ENST00000443727 CALML5Q9NZT1 146 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 HEATR5AQ86XA9 2040 aa17.87■□□□□ 0.45
LRCH3-208ENST00000443727 SMAD9O15198 467 aaKnown RBP17.86■□□□□ 0.45
LRCH3-208ENST00000443727 TGDSO95455 350 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 FESP07332 822 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 ZCCHC18P0CG32 403 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 ETFAP13804 333 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 PSMB1P20618 241 aaKnown RBP17.86■□□□□ 0.45
LRCH3-208ENST00000443727 IL32P24001 234 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 FKBP2P26885 142 aaKnown RBP17.86■□□□□ 0.45
LRCH3-208ENST00000443727 HTR3AP46098 478 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 DSTNP60981 165 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 BEX5Q5H9J7 111 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 C22orf34Q6ZV56 151 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 ZNF775Q96BV0 537 aaPredicted RBP17.86■□□□□ 0.45
LRCH3-208ENST00000443727 HDHD5Q9BXW7 423 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 SLCO1B3Q9NPD5 702 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 ARGLU1Q9NWB6 273 aaPredicted RBP17.86■□□□□ 0.45
LRCH3-208ENST00000443727 BEX4Q9NWD9 120 aaPredicted RBP17.86■□□□□ 0.45
LRCH3-208ENST00000443727 MED13LQ71F56 2210 aa17.86■□□□□ 0.45
LRCH3-208ENST00000443727 CFAP73A6NFT4 308 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 AP3D1O14617 1153 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 CYTIPO60759 359 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 BCHEP06276 602 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 THBDP07204 575 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 CD53P19397 219 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 KLK2P20151 261 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 CRISP3P54108 245 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 TTMPQ5BVD1 217 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 MRPL2Q5T653 305 aaKnown RBP17.85■□□□□ 0.45
LRCH3-208ENST00000443727 HDXQ7Z353 690 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 S100PBPQ96BU1 408 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 DNAJA3Q96EY1 480 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 AURKBQ96GD4 344 aaPredicted RBP17.85■□□□□ 0.45
LRCH3-208ENST00000443727 HS3ST6Q96QI5 342 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 PSD2Q9BQI7 771 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 OR10A4Q9H209 315 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 BCO1Q9HAY6 547 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 THUMPD1Q9NXG2 353 aaKnown RBP17.85■□□□□ 0.45
LRCH3-208ENST00000443727 EMC3Q9P0I2 261 aa17.85■□□□□ 0.45
LRCH3-208ENST00000443727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-208ENST00000443727 ADAP00813 363 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 FPR1P21462 350 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 RPS4Y1P22090 263 aaKnown RBP17.84■□□□□ 0.45
LRCH3-208ENST00000443727 CLK1P49759 484 aaKnown RBP17.84■□□□□ 0.45
LRCH3-208ENST00000443727 IDH3AP50213 366 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 POLR2HP52434 150 aaKnown RBP17.84■□□□□ 0.45
LRCH3-208ENST00000443727 P2RY6Q15077 328 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 ACKR1Q16570 336 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 GTDC1Q4AE62 458 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 LIN52Q52LA3 116 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 GALNT5Q7Z7M9 940 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 MTDHQ86UE4 582 aaKnown RBP17.84■□□□□ 0.45
LRCH3-208ENST00000443727 ZNF440Q8IYI8 595 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 ZNF100Q8IYN0 542 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms