RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SEC14L3Q9UDX4 400 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 C3orf18Q9UK00 162 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PSMD13Q9UNM6 376 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 GMPPBQ9Y5P6 360 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 KLF2Q9Y5W3 355 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAPGEF6Q8TEU7 1601 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 PTPRKQ15262 1439 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 NEDD4P46934 1319 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 UBN2Q6ZU65 1347 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 KIAA1210Q9ULL0 1709 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 SAA2-SAA4A0A096LPE2 208 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 NPIPA2E9PIF3 369 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 BCKDKO14874 412 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 HBQ1P09105 142 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 GIMD1P0DJR0 217 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 IGHV4-38-2P0DP08 117 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 NCK1P16333 377 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 HNRNPH3P31942 346 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 ALDH3B2P48448 385 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 DVL1P1P54792 670 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 NAPAP54920 295 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPL23AP62750 156 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 VSNL1P62760 191 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLAMF1Q13291 335 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 KLF5Q13887 457 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 CAMK4Q16566 473 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 POM121L1PQ3SYA9 428 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 TCHHL1Q5QJ38 904 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 METTL21CQ5VZV1 264 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 ABHD12BQ7Z5M8 362 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 LUZP2Q86TE4 346 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 ITIH5Q86UX2 942 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 GID4Q8IVV7 300 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 VSTM4Q8IW00 320 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 APLFQ8IW19 511 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 FAM89BQ8N5H3 189 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 PNPT1Q8TCS8 783 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 ARNTL2Q8WYA1 636 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM143Q96AN5 459 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 PACRGQ96M98 296 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 MBOAT7Q96N66 472 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 OLFM3Q96PB7 478 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 RANBP9Q96S59 729 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 SEC22CQ9BRL7 303 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 CSNK1G1Q9HCP0 422 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 ASCL3Q9NQ33 180 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 MRPL22Q9NWU5 206 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 EXOGQ9Y2C4 368 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 CAMSAP1Q5T5Y3 1602 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZCCHC11Q5TAX3 1644 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 POGZQ7Z3K3 1410 aa3.57□□□□□ -1.84
CDC42BPA-207ENST00000441725 METTL21EPA6NDL7 271 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF98A6NK75 572 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 LMO7DNF2Z398 122 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SH2D1BO14796 132 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 LIN7AO14910 233 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ARPC3O15145 178 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 FRAT2O75474 233 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 STX11O75558 287 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 KRT33AO76009 404 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 VTNP04004 478 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 GPIP06744 558 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ANXA5P08758 320 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ALPIP09923 528 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 HSD11B1P28845 292 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CEACAM8P31997 349 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CYLC1P35663 651 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CHI3L1P36222 383 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC1A1P43005 524 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 STK19P49842 368 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCR8P51685 355 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 NKX2-5P52952 324 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 PLK1P53350 603 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPS4XP62701 263 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPL10AP62906 217 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SRSF9Q13242 221 aaKnown RBP eCLIP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 P2RY6Q15077 328 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TWIST1Q15672 202 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TSC22D1Q15714 1073 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 KLHL22Q53GT1 634 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 DCAF12Q5T6F0 453 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 HES5Q5TA89 166 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SEL1L2Q5TEA6 688 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 KHDRBS2Q5VWX1 349 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAET1LQ5VY80 246 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 RFWD3Q6PCD5 774 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 C4orf22Q6V702 233 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC35D2Q76EJ3 337 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 GOLGA7Q7Z5G4 137 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 C17orf64Q86WR6 236 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRAM1L1Q8N609 369 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CNBD1Q8NA66 436 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR10J5Q8NHC4 309 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 KCNG3Q8TAE7 436 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 NTN5Q8WTR8 489 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ESR2Q92731 530 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 DGCR14Q96DF8 476 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms