RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 GABARAPO95166 117 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 AHSA1O95433 338 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 TP53P04637 393 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 IGFBP1P08833 259 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 TSPAN19P0C672 248 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ICAM2P13598 275 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 FUT1P19526 365 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ABCD3P28288 659 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 GTF2E2P29084 291 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 MASP1P48740 699 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 POLR2HP52434 150 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 RPS15P62841 145 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 IRF3Q14653 427 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 MED22Q15528 200 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 BTBD16Q32M84 506 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ARMCX4Q5H9R4 360 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 PLA2G2CQ5R387 149 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 FNDC7Q5VTL7 733 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 MRPL14Q6P1L8 145 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 TMPRSS11AQ6ZMR5 421 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 RAB11FIP2Q7L804 512 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 NANOGNBQ7Z5D8 188 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 POGLUT1Q8NBL1 392 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 FAM98AQ8NCA5 519 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 NFAM1Q8NET5 270 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 SH3YL1Q96HL8 342 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 COG8Q96MW5 612 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 SPSB2Q99619 263 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 IRF2BPLQ9H1B7 796 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ZBTB20Q9HC78 741 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 ISYNA1Q9NPH2 558 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 INPP5EQ9NRR6 644 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 MRPS18AQ9NVS2 196 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 PI4KAP42356 2102 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 NUP210LQ5VU65 1888 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 SURF4O15260 269 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 AIREO43918 545 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 OR6A2O95222 327 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 TIAF1O95411 115 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 THY1P04216 161 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 RAB40ALP0C0E4 278 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 HSMCR30P0CW71 290 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ADORA3P0DMS8 318 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 PEPDP12955 493 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 MAKP20794 623 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 HTR1FP30939 366 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 EVI2BP34910 448 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 GP2P55259 537 aaKnown RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 TCEAL6Q6IPX3 200 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 DPY19L2P2Q6ZN68 376 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 GDPGP1Q6ZNW5 385 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 MAMDC2Q7Z304 686 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 SHISA5Q8N114 240 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 KLHL36Q8N4N3 616 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 BMPERQ8N8U9 685 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 OR8D4Q8NGM9 314 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 OR2Y1Q8NGV0 311 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 OR4Q3Q8NH05 313 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 OR51A7Q8NH64 312 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 M1APQ8TC57 530 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ST8SIA1Q92185 356 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ATOH1Q92858 354 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 TCEAL3Q969E4 200 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 YIPF6Q96EC8 236 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ARSGQ96EG1 525 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 LIN37Q96GY3 246 aaPredicted RBP5.52□□□□□ -1.53
VPS50-205ENST00000441602 SIGLEC11Q96RL6 698 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 GPA33Q99795 319 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 ZNF426Q9BUY5 554 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 PLA2G12AQ9BZM1 189 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 NRSN2Q9GZP1 204 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 METTL7AQ9H8H3 244 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 APMAPQ9HDC9 416 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 CMC2Q9NRP2 79 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 SERINC1Q9NRX5 453 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 KLRF1Q9NZS2 232 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 PPP4R1LQ9P1A2 415 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 SEC14L4Q9UDX3 406 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 PISDQ9UG56 409 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 SIGLEC7Q9Y286 467 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 PCDHGB7Q9Y5F8 929 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 NINQ8N4C6 2090 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 SDK1Q7Z5N4 2213 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TRAV36DV7A0A075B6V5 113 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LOC102723996A0A087X1L8 192 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 IGHV3-20A0A0C4DH32 117 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LNP1A1A4G5 178 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CCRL2O00421 344 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 IMPA2O14732 288 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 GNB5O14775 395 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 OR2T1O43869 369 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LRP3O75074 770 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CH25HO95992 272 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 MT-ATP6P00846 226 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LCKP06239 509 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TACR3P29371 465 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SLC15A1P46059 708 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 MAP2K6P52564 334 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ACTC1P68032 377 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms