RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ALOXE3Q9BYJ1 711 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MMADHCQ9H3L0 296 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PIF1Q9H611 641 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 DENND2DQ9H6A0 471 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 BARX1Q9HBU1 254 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MKKSQ9NPJ1 570 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 KLHL1Q9NR64 748 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 YAE1D1Q9NRH1 226 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ZCCHC3Q9NUD5 404 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 GIMAP4Q9NUV9 329 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 LPAR3Q9UBY5 353 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF639Q9UID6 485 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PSME2Q9UL46 239 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CDC14AQ9UNH5 594 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 POMPQ9Y244 141 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MMACHCQ9Y4U1 282 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SNX8Q9Y5X2 465 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 KCNE3Q9Y6H6 103 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF780BQ9Y6R6 833 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SPACA6W5XKT8 324 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 FREM3P0C091 2139 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SCN3AQ9NY46 2000 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 IGHV3-20A0A0C4DH32 117 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 A0A1B0GTH9 108 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 A0A1W2PQ72 361 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 TUBAL3A6NHL2 446 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MBD3L5A6NJ08 208 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 A8MUA0 341 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 AQP7O14520 342 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 TFECO14948 347 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ARPC2O15144 300 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ZNHIT1O43257 154 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 EMC8O43402 210 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 PLOD3O60568 738 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ENTPD5O75356 428 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 BCAS2O75934 225 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 HMGN2P05204 90 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 IFI6P09912 130 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 OR12D1P0DN82 309 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ACP2P11117 423 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 DDX5P17844 614 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 EGR1P18146 543 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 GGT1P19440 569 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 IL10P22301 178 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MPIP34949 423 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MAP3K8P41279 467 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 PRKAG1P54619 331 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ACTR3P61158 418 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 FUT7Q11130 342 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 STX4Q12846 297 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SLC13A2Q13183 592 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 TP53BP2Q13625 1128 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SNTB1Q13884 538 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SERTAD2Q14140 314 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 TRIM25Q14258 630 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 LASP1Q14847 261 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 EXOSC7Q15024 291 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SPDYE7PQ495Y7 208 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MFSD4BQ5TF39 518 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 CD276Q5ZPR3 534 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MFSD12Q6NUT3 480 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 B3GNT6Q6ZMB0 384 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ANKRD37Q7Z713 158 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 GALNT10Q86SR1 603 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SERPINA11Q86U17 422 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MICU2Q8IYU8 434 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SAMD14Q8IZD0 417 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ST13P4Q8IZP2 240 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ARHGAP24Q8N264 748 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF615Q8N8J6 731 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 POGLUT1Q8NBL1 392 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MDS2Q8NDY4 140 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 HIPK4Q8NE63 616 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 OR2T12Q8NG77 320 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 OR5D16Q8NGK9 328 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 FBXO30Q8TB52 745 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MIPOL1Q8TD10 442 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SFXN5Q8TD22 340 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SMPDL3BQ92485 455 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 HOXB13Q92826 284 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 RAB8BQ92930 207 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 RNASE6Q93091 150 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MAL2Q969L2 176 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ASB9Q96DX5 294 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SLC35A4Q96G79 324 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SCMH1Q96GD3 660 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 REXO5Q96IC2 774 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 SLC35G5Q96KT7 338 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF354BQ96LW1 612 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 DGAT2Q96PD7 388 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 RAB3IPQ96QF0 476 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 KCNJ15Q99712 375 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 KCTD14Q9BQ13 255 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ECSITQ9BQ95 431 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 UTP23Q9BRU9 249 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 BEX2Q9BXY8 128 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 OR51I1Q9H343 314 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 CXorf21Q9HAI6 301 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms