RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 RNF6Q9Y252 685 aa13.31□□□□□ -0.28
TNFRSF1A-204ENST00000440083 OR6C76A6NM76 312 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 WWP2O00308 870 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SOX14O95416 240 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CT45A8P0DMV1 189 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CT45A9P0DMV2 189 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 HPGDP15428 266 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TEKQ02763 1124 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 KLRB1Q12918 225 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TUBA3CQ13748 450 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 FGFBP1Q14512 234 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PTGES3Q15185 160 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 OR1Q1Q15612 314 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PLEKHN1Q494U1 663 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PRR30Q53SZ7 412 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CT45A2Q5DJT8 189 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 FOXB2Q5VYV0 432 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TUBA3EQ6PEY2 450 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 GRAMD2AQ8IUY3 354 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 Q8NA96 180 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TEX47Q8TBZ9 253 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 OIT3Q8WWZ8 545 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TM9SF4Q92544 642 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CCDC90BQ9GZT6 254 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SELENONQ9NZV5 590 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TEKT2Q9UIF3 430 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
TNFRSF1A-204ENST00000440083 A0A087WUU8 490 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 C2orf92A0A1B0GVN3 265 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SCDO00767 359 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ITGA10O75578 1167 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 OR2J2O76002 312 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 GKN3PP0CG01 181 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 DRD5P21918 477 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 IL12BP29460 328 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 LCN1P31025 176 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TTKP33981 857 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CD96P40200 585 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NEDD8Q15843 81 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SLX4IPQ5VYV7 408 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ZNF613Q6PF04 617 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CASP12Q6UXS9 341 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CD300LDQ6UXZ3 194 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 Q6ZS92 163 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 MBOAT2Q6ZWT7 520 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CCDC71Q8IV32 467 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ZNF440Q8IYI8 595 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SVOPQ8N4V2 548 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ZNF540Q8NDQ6 660 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 IPCEF1Q8WWN9 437 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CNOT9Q92600 299 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SLC35B4Q969S0 331 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SIGLEC12Q96PQ1 595 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NODALQ96S42 347 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 HES7Q9BYE0 225 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PRRG3Q9BZD7 231 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TRIM2Q9C040 744 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■■□□ 14.9
TNFRSF1A-204ENST00000440083 DNAJB12Q9NXW2 375 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 REV1Q9UBZ9 1251 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SLC35A3Q9Y2D2 325 aa13.29□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SPENQ96T58 3664 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SERINC4A6NH21 518 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PTGES3LE9PB15 166 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NPIPB9F8W1W9 429 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 XPNPEP2O43895 674 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NOL3O60936 208 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 IL33O95760 270 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CSTAP01040 98 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PRG2P13727 222 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 HTR2AP28223 471 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TNFSF10P50591 281 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PSPHP78330 225 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 OC90Q02509 493 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PLCXD2Q0VAA5 305 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TSPAN31Q12999 210 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 EBPQ15125 230 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 SPINK14Q6IE38 97 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PTCHD4Q6ZW05 846 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PRICKLE2Q7Z3G6 844 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ZER1Q7Z7L7 766 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NKAIN4Q8IVV8 208 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ARMC10Q8N2F6 343 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 PNPLA2Q96AD5 504 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 EFHD2Q96C19 240 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 FAM46AQ96IP4 442 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 UTP23Q9BRU9 249 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 TEX12Q9BXU0 123 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 YIPF3Q9GZM5 350 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 WWTR1Q9GZV5 400 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 NXF5Q9H1B4 397 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 CLN6Q9NWW5 311 aa13.28□□□□□ -0.28
TNFRSF1A-204ENST00000440083 ABI3Q9P2A4 366 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms